RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 OR2D3Q8NGH3 330 aa16.27■□□□□ 0.2
PVT1-219ENST00000523427 G3V3Q6 166 aa16.26■□□□□ 0.19
PVT1-219ENST00000523427 NDUFS6O75380 124 aaKnown RBP16.26■□□□□ 0.19
PVT1-219ENST00000523427 MBD3L1Q8WWY6 194 aa16.26■□□□□ 0.19
PVT1-219ENST00000523427 IGLC6P0CF74 106 aa16.24■□□□□ 0.19
PVT1-219ENST00000523427 COTL1Q14019 142 aa16.24■□□□□ 0.19
PVT1-219ENST00000523427 NIT2Q9NQR4 276 aa16.24■□□□□ 0.19
PVT1-219ENST00000523427 SMLR1H3BR10 107 aa16.23■□□□□ 0.19
PVT1-219ENST00000523427 CACNG7P62955 275 aa16.23■□□□□ 0.19
PVT1-219ENST00000523427 PGLYRP4Q96LB8 373 aa16.23■□□□□ 0.19
PVT1-219ENST00000523427 A0A0J9YXV3 536 aa16.21■□□□□ 0.19
PVT1-219ENST00000523427 RPS20P60866 119 aaKnown RBP16.21■□□□□ 0.19
PVT1-219ENST00000523427 CENPWQ5EE01 88 aa16.21■□□□□ 0.19
PVT1-219ENST00000523427 A0A096LNI7 61 aa16.2■□□□□ 0.18
PVT1-219ENST00000523427 H2AFB1P0C5Y9 115 aa16.2■□□□□ 0.18
PVT1-219ENST00000523427 CHCHD10Q8WYQ3 142 aaPredicted RBP16.2■□□□□ 0.18
PVT1-219ENST00000523427 UMAD1C9J7I0 102 aa16.19■□□□□ 0.18
PVT1-219ENST00000523427 TRGC1P0CF51 173 aa16.19■□□□□ 0.18
PVT1-219ENST00000523427 AMMECR1LQ6DCA0 310 aa16.19■□□□□ 0.18
PVT1-219ENST00000523427 LYZL1Q6UWQ5 148 aa16.19■□□□□ 0.18
PVT1-219ENST00000523427 RNASEKQ6P5S7 137 aaKnown RBP16.18■□□□□ 0.18
PVT1-219ENST00000523427 GNG13Q9P2W3 67 aa16.18■□□□□ 0.18
PVT1-219ENST00000523427 NTF3P20783 257 aa16.17■□□□□ 0.18
PVT1-219ENST00000523427 REG3GQ6UW15 175 aa16.17■□□□□ 0.18
PVT1-219ENST00000523427 RAB19A4D1S5 217 aa16.16■□□□□ 0.18
PVT1-219ENST00000523427 IFNA1P01562 189 aa16.16■□□□□ 0.18
PVT1-219ENST00000523427 KRTAP10-8P60410 259 aa16.16■□□□□ 0.18
PVT1-219ENST00000523427 LINC00526Q96FQ7 95 aa16.16■□□□□ 0.18
PVT1-219ENST00000523427 F2Z2F3 143 aa16.15■□□□□ 0.18
PVT1-219ENST00000523427 CCL20P78556 96 aa16.15■□□□□ 0.18
PVT1-219ENST00000523427 SPINK6Q6UWN8 80 aa16.15■□□□□ 0.18
PVT1-219ENST00000523427 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.14■□□□□ 0.17
PVT1-219ENST00000523427 GVQW2A0A096LPI5 108 aaPredicted RBP16.14■□□□□ 0.17
PVT1-219ENST00000523427 TRAV26-2A0A0B4J265 109 aa16.14■□□□□ 0.17
PVT1-219ENST00000523427 IGKV2-29A2NJV5 120 aaPredicted RBP16.14■□□□□ 0.17
PVT1-219ENST00000523427 XKRY2A2RUG3 117 aa16.14■□□□□ 0.17
PVT1-219ENST00000523427 C19orf71A6NCJ1 209 aa16.14■□□□□ 0.17
PVT1-219ENST00000523427 C11orf52Q96A22 123 aa16.13■□□□□ 0.17
PVT1-219ENST00000523427 GNG4P50150 75 aa16.12■□□□□ 0.17
PVT1-219ENST00000523427 TWIST1Q15672 202 aa16.12■□□□□ 0.17
PVT1-219ENST00000523427 Q6ZNX1 250 aa16.12■□□□□ 0.17
PVT1-219ENST00000523427 GATD1Q8NB37 220 aa16.12■□□□□ 0.17
PVT1-219ENST00000523427 GAS8-AS1O95177 125 aa16.11■□□□□ 0.17
PVT1-219ENST00000523427 XCL1P47992 114 aa16.11■□□□□ 0.17
PVT1-219ENST00000523427 FOXI1Q12951 378 aa16.1■□□□□ 0.17
PVT1-219ENST00000523427 MANBALQ9NQG1 85 aa16.1■□□□□ 0.17
PVT1-219ENST00000523427 FGF6P10767 208 aa16.09■□□□□ 0.17
PVT1-219ENST00000523427 RPL39LQ96EH5 51 aaKnown RBP16.09■□□□□ 0.17
PVT1-219ENST00000523427 KANTRA0A1W2PQU2 76 aa16.08■□□□□ 0.16
PVT1-219ENST00000523427 LINC00474Q9P2X8 69 aa16.08■□□□□ 0.16
PVT1-219ENST00000523427 APCSP02743 223 aa16.07■□□□□ 0.16
PVT1-219ENST00000523427 ZNF345Q14585 488 aa16.07■□□□□ 0.16
PVT1-219ENST00000523427 Q6ZRP5 223 aa16.07■□□□□ 0.16
PVT1-219ENST00000523427 SRSF9Q13242 221 aaKnown RBP eCLIP16.06■□□□□ 0.164e-6■■■■□ 20.8
PVT1-219ENST00000523427 C9orf62Q8N4C0 152 aa16.06■□□□□ 0.16
PVT1-219ENST00000523427 CARD19Q96LW7 228 aa16.06■□□□□ 0.16
PVT1-219ENST00000523427 CCL25O15444 150 aa16.05■□□□□ 0.16
PVT1-219ENST00000523427 BCL2L11O43521 198 aa16.05■□□□□ 0.16
PVT1-219ENST00000523427 MED9Q9NWA0 146 aa16.05■□□□□ 0.16
PVT1-219ENST00000523427 CTRLP40313 264 aa16.04■□□□□ 0.16
PVT1-219ENST00000523427 NUDT10Q8NFP7 164 aa16.04■□□□□ 0.16
PVT1-219ENST00000523427 NUDT11Q96G61 164 aa16.04■□□□□ 0.16
PVT1-219ENST00000523427 TRBV20OR9-2A0A075B6H5 130 aa16.03■□□□□ 0.16
PVT1-219ENST00000523427 NCR2O95944 276 aa16.03■□□□□ 0.16
PVT1-219ENST00000523427 FOXA3P55318 350 aaPredicted RBP16.03■□□□□ 0.16
PVT1-219ENST00000523427 OR5A1Q8NGJ0 315 aa16.03■□□□□ 0.16
PVT1-219ENST00000523427 BTF3L4Q96K17 158 aa16.03■□□□□ 0.16
PVT1-219ENST00000523427 IGHV1-58A0A0C4DH39 117 aa16.02■□□□□ 0.16
PVT1-219ENST00000523427 SMIM12Q96EX1 92 aa16.02■□□□□ 0.16
PVT1-219ENST00000523427 PKIGQ9Y2B9 76 aa16.02■□□□□ 0.16
PVT1-219ENST00000523427 LINC00959A0A1B0GUT2 108 aa16.01■□□□□ 0.15
PVT1-219ENST00000523427 SDHAF1A6NFY7 115 aa16.01■□□□□ 0.15
PVT1-219ENST00000523427 H7C423 109 aa16.01■□□□□ 0.15
PVT1-219ENST00000523427 GAGE2BQ13066 116 aa16.01■□□□□ 0.15
PVT1-219ENST00000523427 TMEM101Q96IK0 257 aa16.01■□□□□ 0.15
PVT1-219ENST00000523427 BIN3Q9NQY0 253 aa16.01■□□□□ 0.15
PVT1-219ENST00000523427 ZNF561-AS1K7EIQ3 104 aa16■□□□□ 0.15
PVT1-219ENST00000523427 PMCHP20382 165 aa16■□□□□ 0.15
PVT1-219ENST00000523427 EIF5AP63241 154 aaKnown RBP16■□□□□ 0.15
PVT1-219ENST00000523427 SYCNQ0VAF6 134 aa16■□□□□ 0.15
PVT1-219ENST00000523427 MEF2BQ02080 365 aaPredicted RBP15.99■□□□□ 0.15
PVT1-219ENST00000523427 SMIM15Q7Z3B0 74 aa15.99■□□□□ 0.15
PVT1-219ENST00000523427 RNASE7Q9H1E1 156 aaKnown RBP15.99■□□□□ 0.15
PVT1-219ENST00000523427 TRAV1-1A0A0B4J248 108 aa15.97■□□□□ 0.15
PVT1-219ENST00000523427 HMSDA8MTL9 139 aa15.97■□□□□ 0.15
PVT1-219ENST00000523427 PDE6DO43924 150 aa15.97■□□□□ 0.15
PVT1-219ENST00000523427 ZNF25P17030 456 aaPredicted RBP15.97■□□□□ 0.15
PVT1-219ENST00000523427 CNFNQ9BYD5 112 aa15.97■□□□□ 0.15
PVT1-219ENST00000523427 RPP21Q9H633 154 aaKnown RBP15.97■□□□□ 0.15
PVT1-219ENST00000523427 FAM231BA6NCW3 169 aa15.96■□□□□ 0.15
PVT1-219ENST00000523427 TEX46H3BTG2 121 aa15.96■□□□□ 0.15
PVT1-219ENST00000523427 I3L3M4 83 aa15.96■□□□□ 0.15
PVT1-219ENST00000523427 PTTG1IPP53801 180 aa15.96■□□□□ 0.15
PVT1-219ENST00000523427 SS18Q15532 418 aa15.96■□□□□ 0.15
PVT1-219ENST00000523427 RGS21Q2M5E4 152 aa15.95■□□□□ 0.14
PVT1-219ENST00000523427 BATF3Q9NR55 127 aa15.95■□□□□ 0.14
PVT1-219ENST00000523427 A0A1W2PNN7 141 aa15.94■□□□□ 0.14
PVT1-219ENST00000523427 CAMPP49913 170 aa15.93■□□□□ 0.14
PVT1-219ENST00000523427 TMEM242Q9NWH2 141 aa15.93■□□□□ 0.14
PVT1-219ENST00000523427 LPAP08519 4548 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms