RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 TMEM218A2RU14 115 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 TMEM262E9PQX1 116 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 H3BQ15 152 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 APOC4-APOC2K7ER74 178 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 GNGT2O14610 69 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 SNCGO76070 127 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 TNFP01375 233 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 APOC2P02655 101 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 APOC3P02656 99 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 S100A8P05109 93 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 NMBP08949 121 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 CCL3L1P16619 93 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 CBLN1P23435 193 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 ASIPP42127 132 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 GUCA1AP43080 201 aaPredicted RBP0.1□□□□□ -2.39
PCM1-214ENST00000521338 UBE2D1P51668 147 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 TPPP2P59282 170 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 GNG2P59768 71 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 UBA52P62987 128 aaKnown RBP0.1□□□□□ -2.39
PCM1-214ENST00000521338 WHAMMP3Q1A5X7 153 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 PYY3Q5JQD4 70 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 COL5A1-AS1Q5SY13 56 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 MRPL54Q6P161 138 aaKnown RBP0.1□□□□□ -2.39
PCM1-214ENST00000521338 SLC48A1Q6P1K1 146 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 GTF2H5Q6ZYL4 71 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 C5orf38Q86SI9 138 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 FAM223AQ8IWN6 122 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 C8orf59Q8N0T1 100 aaPredicted RBP0.1□□□□□ -2.39
PCM1-214ENST00000521338 C20orf197Q8N268 126 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 ACBD7Q8N6N7 88 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 LCN9Q8WX39 176 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 SPTSSAQ969W0 71 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 TCEAL7Q9BRU2 100 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 NAA60Q9H7X0 242 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 LINC00472Q9H8W2 130 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 SAR1AQ9NR31 198 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 FAIMQ9NVQ4 179 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 CCDC167Q9P0B6 97 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 HIGD1BQ9P298 99 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 CACFD1Q9UGQ2 172 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 MYH6P13533 1939 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 ABCA12Q86UK0 2595 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 QRICH2Q9H0J4 1663 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 ROBO1Q9Y6N7 1651 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 ZNF609O15014 1411 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 CPSF1Q10570 1443 aaKnown RBP0.1□□□□□ -2.39
PCM1-214ENST00000521338 MYOM3Q5VTT5 1437 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 C10orf71Q711Q0 1435 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 SMG6Q86US8 1419 aaKnown RBP0.1□□□□□ -2.39
PCM1-214ENST00000521338 VPS8Q8N3P4 1428 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 SCAPERQ9BY12 1400 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 FAT2Q9NYQ8 4349 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 LAMC3Q9Y6N6 1575 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 MYOM2P54296 1465 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 GOLGA3Q08378 1498 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 IFT140Q96RY7 1462 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 MRC2Q9UBG0 1479 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 NRXN1Q9ULB1 1477 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 WDR7Q9Y4E6 1490 aa0.1□□□□□ -2.39
PCM1-214ENST00000521338 MUC22E2RYF6 1773 aaPredicted RBP0.09□□□□□ -2.39
PCM1-214ENST00000521338 IGF2RP11717 2491 aa0.09□□□□□ -2.39
PCM1-214ENST00000521338 ANKRD36BQ8N2N9 1353 aa0.09□□□□□ -2.39
PCM1-214ENST00000521338 AKAP11Q9UKA4 1901 aa0.09□□□□□ -2.39
PCM1-214ENST00000521338 KIAA0100Q14667 2235 aaKnown RBP0.09□□□□□ -2.39
PCM1-214ENST00000521338 COL4A6Q14031 1691 aa0.09□□□□□ -2.39
PCM1-214ENST00000521338 ZFYVE26Q68DK2 2539 aa0.09□□□□□ -2.39
PCM1-214ENST00000521338 PIEZO1Q92508 2521 aa0.09□□□□□ -2.39
PCM1-214ENST00000521338 SPENQ96T58 3664 aaKnown RBP0.09□□□□□ -2.39
PCM1-214ENST00000521338 TRBV7-3A0A075B6L6 115 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 A0A087WVE0 104 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 GVQW2A0A096LPI5 108 aaPredicted RBP0.09□□□□□ -2.4
PCM1-214ENST00000521338 TRGV1A0A0A0MS02 117 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 TRBV7-1A0A0A6YYK4 115 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 A0A0G2JND7 137 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 TRBV10-3A0A0K0K1G6 114 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 UBE2L5PA0A1B0GUS4 154 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 PVALEFA0A1B0GWK0 134 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 IGLC7A0M8Q6 106 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 FAM24AA6NFZ4 105 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 FAM223BA6NKX1 122 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 G3V318 75 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 H3BQF6 201 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 CHKB-CPT1BH3BT56 60 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 H7BZZ5 65 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 M0R135 149 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 M0R3E3 92 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 SIX6O95475 246 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 SFT2D2O95562 160 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 PPP1R17O96001 155 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 TRAPPC2P0DI81 140 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 TRAPPC2BP0DI82 140 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 PIPP12273 146 aaPredicted RBP0.09□□□□□ -2.4
PCM1-214ENST00000521338 FAUP35544 74 aaKnown RBP0.09□□□□□ -2.4
PCM1-214ENST00000521338 CCL18P55774 89 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 EDDM3BP56851 147 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 UBE2D3P61077 147 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 GNG11P61952 73 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 UBE2D2P62837 147 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 SEC11AP67812 179 aa0.09□□□□□ -2.4
PCM1-214ENST00000521338 UBE2L3P68036 154 aaKnown RBP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms