RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 MYMXA0A1B0GTQ4 84 aa8.31□□□□□ -1.08
CLK4-206ENST00000520878 RNASE1P07998 156 aaKnown RBP8.31□□□□□ -1.08
CLK4-206ENST00000520878 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
CLK4-206ENST00000520878 CST9LQ9H4G1 147 aa8.31□□□□□ -1.08
CLK4-206ENST00000520878 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
CLK4-206ENST00000520878 RPL24P83731 157 aaKnown RBP8.31□□□□□ -1.08
CLK4-206ENST00000520878 Q6ZTI0 123 aa8.31□□□□□ -1.08
CLK4-206ENST00000520878 SCGB1C2P0DMR2 95 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 SAMD5Q5TGI4 173 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 TRAV12-1A0A0B4J245 112 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 UBE2L6O14933 153 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 RPL36AP83881 106 aaKnown RBP8.3□□□□□ -1.08
CLK4-206ENST00000520878 Q1RN00 199 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 RPL36ALQ969Q0 106 aaKnown RBP8.3□□□□□ -1.08
CLK4-206ENST00000520878 RHODO00212 210 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 C20orf203Q8NBC4 194 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 VPS25Q9BRG1 176 aa8.3□□□□□ -1.08
CLK4-206ENST00000520878 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 TRAV13-1A0A0B4J241 112 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 TRBV27A0A0K0K1C4 114 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 HILS1P60008 231 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 NPC2P61916 151 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 ZNF479Q96JC4 524 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 SIVA1O15304 175 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 CFAP126Q5VTH2 177 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 Q6ZSN1 163 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 TRAV25A0A0B4J276 109 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 NXPH4O95158 308 aa8.29□□□□□ -1.08
CLK4-206ENST00000520878 NIPBLQ6KC79 2804 aaeCLIP8.29□□□□□ -1.08
CLK4-206ENST00000520878 CEND1Q8N111 149 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 LINC01549A6NIU2 74 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 PRSS47A8MTI9 375 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 RHOHQ15669 191 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 H3BRM9 83 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 TSHBP01222 138 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 MTURNQ8N3F0 131 aa8.28□□□□□ -1.08
CLK4-206ENST00000520878 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 HTN3P15516 51 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 MORN3Q6PF18 240 aaPredicted RBP8.27□□□□□ -1.09
CLK4-206ENST00000520878 C1QTNF4Q9BXJ3 329 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 ZMAT4Q9H898 229 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 A6NJY4 79 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 TMEM262E9PQX1 116 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 J3QQQ9 107 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 PSMB2P49721 201 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 CMC4P56277 68 aaPredicted RBP8.27□□□□□ -1.09
CLK4-206ENST00000520878 C1orf158Q8N1D5 194 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 PLEKHB2Q96CS7 222 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 ZNF625Q96I27 306 aaPredicted RBP8.27□□□□□ -1.09
CLK4-206ENST00000520878 TIMM17AQ99595 171 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
CLK4-206ENST00000520878 A0A096LPF7 62 aa8.26□□□□□ -1.09
CLK4-206ENST00000520878 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
CLK4-206ENST00000520878 DEFB4AO15263 64 aa8.26□□□□□ -1.09
CLK4-206ENST00000520878 TRBV6-5A0A0K0K1A5 114 aa8.26□□□□□ -1.09
CLK4-206ENST00000520878 E9PLD3 99 aa8.26□□□□□ -1.09
CLK4-206ENST00000520878 LINC01546A6NGU7 62 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 KRTAP1-1Q07627 177 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 CHCHD5Q9BSY4 110 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 TRAV8-3A0A0A6YYJ7 113 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 TOMM7Q9P0U1 55 aa8.25□□□□□ -1.09
CLK4-206ENST00000520878 IGLV4-3A0A075B6K6 122 aa8.24□□□□□ -1.09
CLK4-206ENST00000520878 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
CLK4-206ENST00000520878 LINC00467Q9BRT7 94 aa8.24□□□□□ -1.09
CLK4-206ENST00000520878 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
CLK4-206ENST00000520878 CRLF1O75462 422 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 Q6ZUT4 128 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 TMEM263Q8WUH6 116 aaKnown RBP8.23□□□□□ -1.09
CLK4-206ENST00000520878 HIGD1BQ9P298 99 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 TRBV7-3A0A075B6L6 115 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 GAGE6Q13070 117 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
CLK4-206ENST00000520878 A8MZ25 164 aa8.22□□□□□ -1.09
CLK4-206ENST00000520878 FHL3Q13643 280 aa8.22□□□□□ -1.09
CLK4-206ENST00000520878 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
CLK4-206ENST00000520878 SLC25A29Q8N8R3 303 aa8.22□□□□□ -1.09
CLK4-206ENST00000520878 IGLV4-69A0A075B6H9 119 aa8.21□□□□□ -1.09
CLK4-206ENST00000520878 LOC100131303A0A0U1RQF7 123 aa8.21□□□□□ -1.09
CLK4-206ENST00000520878 IGLV1-51P01701 117 aa8.21□□□□□ -1.09
CLK4-206ENST00000520878 RPL32P62910 135 aaKnown RBP8.21□□□□□ -1.09
CLK4-206ENST00000520878 K7EQD1 137 aa8.21□□□□□ -1.09
CLK4-206ENST00000520878 MEIG1Q5JSS6 88 aa8.21□□□□□ -1.09
CLK4-206ENST00000520878 C11orf72Q8NBR9 251 aa8.21□□□□□ -1.09
CLK4-206ENST00000520878 DEFB135Q30KP9 77 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 MAST4O15021 2626 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 H3BMG7 143 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 RS1O15537 224 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
CLK4-206ENST00000520878 RNASE8Q8TDE3 154 aaKnown RBP8.2□□□□□ -1.1
CLK4-206ENST00000520878 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
CLK4-206ENST00000520878 K7ERU9 68 aa8.19□□□□□ -1.1
CLK4-206ENST00000520878 NDUFA7O95182 113 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms