RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 SULT1A2P50226 295 aa9.73□□□□□ -0.85
CSMD1-207ENST00000520451 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
CSMD1-207ENST00000520451 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
CSMD1-207ENST00000520451 PGLYRP4Q96LB8 373 aa9.73□□□□□ -0.85
CSMD1-207ENST00000520451 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
CSMD1-207ENST00000520451 BIN3Q9NQY0 253 aa9.73□□□□□ -0.85
CSMD1-207ENST00000520451 UBE2L6O14933 153 aa9.72□□□□□ -0.85
CSMD1-207ENST00000520451 NTF3P20783 257 aa9.72□□□□□ -0.85
CSMD1-207ENST00000520451 BCL2P10415 239 aa9.71□□□□□ -0.86
CSMD1-207ENST00000520451 AMTP48728 403 aa9.71□□□□□ -0.86
CSMD1-207ENST00000520451 COTL1Q14019 142 aa9.71□□□□□ -0.86
CSMD1-207ENST00000520451 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
CSMD1-207ENST00000520451 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
CSMD1-207ENST00000520451 CTRLP40313 264 aa9.7□□□□□ -0.86
CSMD1-207ENST00000520451 WDR73Q6P4I2 378 aa9.7□□□□□ -0.86
CSMD1-207ENST00000520451 C9orf62Q8N4C0 152 aa9.7□□□□□ -0.86
CSMD1-207ENST00000520451 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
CSMD1-207ENST00000520451 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
CSMD1-207ENST00000520451 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-207ENST00000520451 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
CSMD1-207ENST00000520451 TWIST1Q15672 202 aa9.69□□□□□ -0.86
CSMD1-207ENST00000520451 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
CSMD1-207ENST00000520451 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
CSMD1-207ENST00000520451 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
CSMD1-207ENST00000520451 RPP21Q9H633 154 aaKnown RBP9.68□□□□□ -0.86
CSMD1-207ENST00000520451 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
CSMD1-207ENST00000520451 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
CSMD1-207ENST00000520451 SLPIP03973 132 aa9.67□□□□□ -0.86
CSMD1-207ENST00000520451 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
CSMD1-207ENST00000520451 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
CSMD1-207ENST00000520451 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
CSMD1-207ENST00000520451 GAGE12HA6NDE8 117 aa9.66□□□□□ -0.86
CSMD1-207ENST00000520451 A0A087WYN8 130 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 K7EN84 100 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
CSMD1-207ENST00000520451 AMMECR1LQ6DCA0 310 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 CFAP161Q6P656 301 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 AKAP14Q86UN6 197 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 SLC51BQ86UW2 128 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 SPACA4Q8TDM5 124 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 RPL39LQ96EH5 51 aaKnown RBP9.65□□□□□ -0.86
CSMD1-207ENST00000520451 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
CSMD1-207ENST00000520451 SMIM15Q7Z3B0 74 aa9.64□□□□□ -0.87
CSMD1-207ENST00000520451 TCTE3Q8IZS6 198 aa9.64□□□□□ -0.87
CSMD1-207ENST00000520451 OCC1Q8TAD7 63 aa9.64□□□□□ -0.87
CSMD1-207ENST00000520451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-207ENST00000520451 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-207ENST00000520451 FOXA3P55318 350 aaPredicted RBP9.63□□□□□ -0.87
CSMD1-207ENST00000520451 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
CSMD1-207ENST00000520451 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
CSMD1-207ENST00000520451 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
CSMD1-207ENST00000520451 NCR2O95944 276 aa9.62□□□□□ -0.87
CSMD1-207ENST00000520451 APCSP02743 223 aa9.62□□□□□ -0.87
CSMD1-207ENST00000520451 Q6ZRU5 148 aa9.62□□□□□ -0.87
CSMD1-207ENST00000520451 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
CSMD1-207ENST00000520451 SDHAF1A6NFY7 115 aa9.61□□□□□ -0.87
CSMD1-207ENST00000520451 FGF6P10767 208 aa9.61□□□□□ -0.87
CSMD1-207ENST00000520451 RPS10P46783 165 aaKnown RBP9.61□□□□□ -0.87
CSMD1-207ENST00000520451 COX6A2Q02221 97 aa9.61□□□□□ -0.87
CSMD1-207ENST00000520451 PLAC8Q9NZF1 115 aa9.61□□□□□ -0.87
CSMD1-207ENST00000520451 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
CSMD1-207ENST00000520451 H7C423 109 aa9.6□□□□□ -0.87
CSMD1-207ENST00000520451 GATCO43716 136 aaKnown RBP9.6□□□□□ -0.87
CSMD1-207ENST00000520451 MT1HL1P0DM35 61 aa9.6□□□□□ -0.87
CSMD1-207ENST00000520451 TEX261Q6UWH6 196 aa9.6□□□□□ -0.87
CSMD1-207ENST00000520451 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
CSMD1-207ENST00000520451 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
CSMD1-207ENST00000520451 PHOX2AO14813 284 aa9.59□□□□□ -0.87
CSMD1-207ENST00000520451 NDUFS6O75380 124 aaKnown RBP9.59□□□□□ -0.87
CSMD1-207ENST00000520451 MAJINQ3KP22 176 aa9.59□□□□□ -0.87
CSMD1-207ENST00000520451 GVQW2A0A096LPI5 108 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-207ENST00000520451 A8MWL6 223 aa9.58□□□□□ -0.88
CSMD1-207ENST00000520451 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
CSMD1-207ENST00000520451 PMCHP20382 165 aa9.58□□□□□ -0.88
CSMD1-207ENST00000520451 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
CSMD1-207ENST00000520451 I3L3M4 83 aa9.57□□□□□ -0.88
CSMD1-207ENST00000520451 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-207ENST00000520451 CEBPGP53567 150 aa9.57□□□□□ -0.88
CSMD1-207ENST00000520451 FOXI1Q12951 378 aa9.57□□□□□ -0.88
CSMD1-207ENST00000520451 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
CSMD1-207ENST00000520451 TMEM101Q96IK0 257 aa9.57□□□□□ -0.88
CSMD1-207ENST00000520451 BTF3L4Q96K17 158 aa9.57□□□□□ -0.88
CSMD1-207ENST00000520451 TRBV6-5A0A0K0K1A5 114 aa9.56□□□□□ -0.88
CSMD1-207ENST00000520451 FAM231BA6NCW3 169 aa9.56□□□□□ -0.88
CSMD1-207ENST00000520451 XCL1P47992 114 aa9.56□□□□□ -0.88
CSMD1-207ENST00000520451 BLOC1S1P78537 153 aa9.56□□□□□ -0.88
CSMD1-207ENST00000520451 OR5A1Q8NGJ0 315 aa9.56□□□□□ -0.88
CSMD1-207ENST00000520451 BORCS7Q96B45 105 aa9.56□□□□□ -0.88
CSMD1-207ENST00000520451 GAS8-AS1O95177 125 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 TSHBP01222 138 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 CT83Q5H943 113 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 ALKAL2Q6UX46 152 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 STPG4Q8N801 248 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 ST20Q9HBF5 79 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 TMEM242Q9NWH2 141 aa9.55□□□□□ -0.88
CSMD1-207ENST00000520451 A0A096LNI7 61 aa9.54□□□□□ -0.88
CSMD1-207ENST00000520451 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
CSMD1-207ENST00000520451 CCL25O15444 150 aa9.54□□□□□ -0.88
CSMD1-207ENST00000520451 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms