RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 UBE2L6O14933 153 aa16.38■□□□□ 0.21
VEGFA-220ENST00000519767 BLOC1S1P78537 153 aa16.38■□□□□ 0.21
VEGFA-220ENST00000519767 Q6ZNX1 250 aa16.38■□□□□ 0.21
VEGFA-220ENST00000519767 RNASE7Q9H1E1 156 aaKnown RBP16.38■□□□□ 0.21
VEGFA-220ENST00000519767 SMIM15Q7Z3B0 74 aa16.37■□□□□ 0.21
VEGFA-220ENST00000519767 TMEM250H0YL14 139 aa16.36■□□□□ 0.21
VEGFA-220ENST00000519767 K7EN84 100 aa16.36■□□□□ 0.21
VEGFA-220ENST00000519767 IGLV4-60A0A075B6I1 120 aa16.35■□□□□ 0.21
VEGFA-220ENST00000519767 IGLV10-54A0A075B6I4 117 aa16.35■□□□□ 0.21
VEGFA-220ENST00000519767 AMTP48728 403 aa16.35■□□□□ 0.21
VEGFA-220ENST00000519767 TEX261Q6UWH6 196 aa16.35■□□□□ 0.21
VEGFA-220ENST00000519767 AKAP14Q86UN6 197 aa16.34■□□□□ 0.21
VEGFA-220ENST00000519767 GATD1Q8NB37 220 aa16.34■□□□□ 0.21
VEGFA-220ENST00000519767 KRTAP10-4P60372 401 aaPredicted RBP16.33■□□□□ 0.2
VEGFA-220ENST00000519767 CNBPP62633 177 aaKnown RBP16.32■□□□□ 0.2
VEGFA-220ENST00000519767 SDIM1Q6ZPB5 146 aa16.32■□□□□ 0.2
VEGFA-220ENST00000519767 GTSF1Q8WW33 167 aa16.32■□□□□ 0.2
VEGFA-220ENST00000519767 A8MWL6 223 aa16.31■□□□□ 0.2
VEGFA-220ENST00000519767 GATCO43716 136 aaKnown RBP16.31■□□□□ 0.2
VEGFA-220ENST00000519767 FAM231DQ6ZW35 169 aa16.31■□□□□ 0.2
VEGFA-220ENST00000519767 LYPD6BQ8NI32 183 aa16.31■□□□□ 0.2
VEGFA-220ENST00000519767 hDV102S1A0JD36 115 aa16.3■□□□□ 0.2
VEGFA-220ENST00000519767 NCR2O95944 276 aa16.3■□□□□ 0.2
VEGFA-220ENST00000519767 ALKAL2Q6UX46 152 aa16.3■□□□□ 0.2
VEGFA-220ENST00000519767 GFRA4Q9GZZ7 299 aa16.3■□□□□ 0.2
VEGFA-220ENST00000519767 AP5S1Q9NUS5 200 aa16.3■□□□□ 0.2
VEGFA-220ENST00000519767 TRAV26-2A0A0B4J265 109 aa16.29■□□□□ 0.2
VEGFA-220ENST00000519767 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-220ENST00000519767 FOXA3P55318 350 aaPredicted RBP16.28■□□□□ 0.2
VEGFA-220ENST00000519767 H7C423 109 aa16.27■□□□□ 0.2
VEGFA-220ENST00000519767 CFAP161Q6P656 301 aa16.27■□□□□ 0.2
VEGFA-220ENST00000519767 OXTP01178 125 aa16.26■□□□□ 0.19
VEGFA-220ENST00000519767 RPL37AP61513 92 aaKnown RBP16.26■□□□□ 0.19
VEGFA-220ENST00000519767 CT83Q5H943 113 aa16.26■□□□□ 0.19
VEGFA-220ENST00000519767 AMMECR1LQ6DCA0 310 aa16.26■□□□□ 0.19
VEGFA-220ENST00000519767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.26■□□□□ 0.19
VEGFA-220ENST00000519767 NDUFS6O75380 124 aaKnown RBP16.25■□□□□ 0.19
VEGFA-220ENST00000519767 IGHV3-64A0A075B6Q5 118 aa16.24■□□□□ 0.19
VEGFA-220ENST00000519767 BORCS7Q96B45 105 aa16.24■□□□□ 0.19
VEGFA-220ENST00000519767 RPL39LQ96EH5 51 aaKnown RBP16.24■□□□□ 0.19
VEGFA-220ENST00000519767 FAM210AQ96ND0 272 aa16.24■□□□□ 0.19
VEGFA-220ENST00000519767 SDHAF1A6NFY7 115 aa16.23■□□□□ 0.19
VEGFA-220ENST00000519767 CEBPGP53567 150 aa16.23■□□□□ 0.19
VEGFA-220ENST00000519767 APCSP02743 223 aa16.22■□□□□ 0.19
VEGFA-220ENST00000519767 CIRBPQ14011 172 aaKnown RBP16.22■□□□□ 0.19
VEGFA-220ENST00000519767 DPH3Q96FX2 82 aa16.22■□□□□ 0.19
VEGFA-220ENST00000519767 EIF5A2Q9GZV4 153 aaKnown RBP16.22■□□□□ 0.19
VEGFA-220ENST00000519767 TRBV6-5A0A0K0K1A5 114 aa16.21■□□□□ 0.19
VEGFA-220ENST00000519767 GAGE12HA6NDE8 117 aa16.21■□□□□ 0.19
VEGFA-220ENST00000519767 I3L3M4 83 aa16.21■□□□□ 0.19
VEGFA-220ENST00000519767 RNASEKQ6P5S7 137 aaKnown RBP16.21■□□□□ 0.19
VEGFA-220ENST00000519767 SMIM7Q9BQ49 75 aa16.21■□□□□ 0.19
VEGFA-220ENST00000519767 FAM231BA6NCW3 169 aa16.2■□□□□ 0.18
VEGFA-220ENST00000519767 SLPIP03973 132 aa16.2■□□□□ 0.18
VEGFA-220ENST00000519767 PMCHP20382 165 aa16.2■□□□□ 0.18
VEGFA-220ENST00000519767 RNF185Q96GF1 192 aa16.2■□□□□ 0.18
VEGFA-220ENST00000519767 hCG_2014768A0A024R1R8 64 aa16.19■□□□□ 0.18
VEGFA-220ENST00000519767 IGKV3OR2-268A0A0C4DH90 116 aa16.19■□□□□ 0.18
VEGFA-220ENST00000519767 PANO1I0J062 215 aa16.19■□□□□ 0.18
VEGFA-220ENST00000519767 FGF6P10767 208 aa16.19■□□□□ 0.18
VEGFA-220ENST00000519767 ZNF25P17030 456 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-220ENST00000519767 TSKUQ8WUA8 353 aa16.19■□□□□ 0.18
VEGFA-220ENST00000519767 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-220ENST00000519767 A0A1B0GUT8 65 aa16.18■□□□□ 0.18
VEGFA-220ENST00000519767 IGKV2-29A2NJV5 120 aaPredicted RBP16.18■□□□□ 0.18
VEGFA-220ENST00000519767 LINC01551Q86U37 167 aa16.18■□□□□ 0.18
VEGFA-220ENST00000519767 CHCHD10Q8WYQ3 142 aaPredicted RBP16.17■□□□□ 0.18
VEGFA-220ENST00000519767 BTF3L4Q96K17 158 aa16.17■□□□□ 0.18
VEGFA-220ENST00000519767 TMEM191AQ9H0A3 160 aa16.17■□□□□ 0.18
VEGFA-220ENST00000519767 ST20Q9HBF5 79 aa16.17■□□□□ 0.18
VEGFA-220ENST00000519767 OSTCQ9NRP0 149 aa16.17■□□□□ 0.18
VEGFA-220ENST00000519767 ZNF727A8MUV8 499 aa16.16■□□□□ 0.18
VEGFA-220ENST00000519767 HIGD1CA8MV81 97 aa16.16■□□□□ 0.18
VEGFA-220ENST00000519767 SERTAD4-AS1Q5TG53 156 aa16.16■□□□□ 0.18
VEGFA-220ENST00000519767 C15orf56Q8N910 161 aa16.16■□□□□ 0.18
VEGFA-220ENST00000519767 TMEM101Q96IK0 257 aa16.16■□□□□ 0.18
VEGFA-220ENST00000519767 LRP1Q07954 4544 aaKnown RBP16.16■□□□□ 0.18
VEGFA-220ENST00000519767 RPS10P46783 165 aaKnown RBP16.15■□□□□ 0.18
VEGFA-220ENST00000519767 OR5A1Q8NGJ0 315 aa16.14■□□□□ 0.17
VEGFA-220ENST00000519767 MRAP2Q96G30 205 aa16.13■□□□□ 0.17
VEGFA-220ENST00000519767 SRP19P09132 144 aaKnown RBP16.12■□□□□ 0.17
VEGFA-220ENST00000519767 ESDP10768 282 aa16.12■□□□□ 0.17
VEGFA-220ENST00000519767 A0A087WYN8 130 aa16.11■□□□□ 0.17
VEGFA-220ENST00000519767 TSHBP01222 138 aa16.11■□□□□ 0.17
VEGFA-220ENST00000519767 RAB4AP20338 218 aa16.11■□□□□ 0.17
VEGFA-220ENST00000519767 POLR2KP53803 58 aaKnown RBP16.11■□□□□ 0.17
VEGFA-220ENST00000519767 SPACA4Q8TDM5 124 aa16.11■□□□□ 0.17
VEGFA-220ENST00000519767 GVQW2A0A096LPI5 108 aaPredicted RBP16.1■□□□□ 0.17
VEGFA-220ENST00000519767 TRBV27A0A0K0K1C4 114 aa16.1■□□□□ 0.17
VEGFA-220ENST00000519767 RIGQ13278 110 aa16.1■□□□□ 0.17
VEGFA-220ENST00000519767 GAS8-AS1O95177 125 aa16.09■□□□□ 0.17
VEGFA-220ENST00000519767 PPP1R17O96001 155 aa16.09■□□□□ 0.17
VEGFA-220ENST00000519767 FOXI1Q12951 378 aa16.09■□□□□ 0.17
VEGFA-220ENST00000519767 HIGD2BQ4VC39 106 aa16.09■□□□□ 0.17
VEGFA-220ENST00000519767 FAM74A3Q4VXF1 159 aa16.09■□□□□ 0.17
VEGFA-220ENST00000519767 MRPL52Q86TS9 123 aaKnown RBP16.09■□□□□ 0.17
VEGFA-220ENST00000519767 CHTF8P0CG12 524 aa16.08■□□□□ 0.16
VEGFA-220ENST00000519767 COX6A2Q02221 97 aa16.08■□□□□ 0.16
VEGFA-220ENST00000519767 TMEM241Q24JQ0 296 aa16.08■□□□□ 0.16
VEGFA-220ENST00000519767 TMEM242Q9NWH2 141 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms