RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 CD7P09564 240 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 ID1P41134 155 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 CDKN1BP46527 198 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 DEFB131AP59861 70 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 NANOS2P60321 138 aaKnown RBP3.24□□□□□ -1.89
PABPC1-212ENST00000519622 RPL39P62891 51 aaKnown RBP3.24□□□□□ -1.89
PABPC1-212ENST00000519622 DEFB114Q30KQ6 69 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 ORMDL2Q53FV1 153 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 SERTAD4-AS1Q5TG53 156 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 ZNRF2Q8NHG8 242 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 PLEKHB2Q96CS7 222 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 TIMM17AQ99595 171 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 NAA38Q9BRA0 125 aaKnown RBP3.24□□□□□ -1.89
PABPC1-212ENST00000519622 KRTAP1-5Q9BYS1 174 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 CHD6Q8TD26 2715 aa3.24□□□□□ -1.89
PABPC1-212ENST00000519622 SETXQ7Z333 2677 aaKnown RBP3.24□□□□□ -1.89
PABPC1-212ENST00000519622 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 SDHAF1A6NFY7 115 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 H7C1H1 209 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 K7EP34 96 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 CD28P10747 220 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 PLA2G2AP14555 144 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 S100A4P26447 101 aaKnown RBP3.23□□□□□ -1.89
PABPC1-212ENST00000519622 PLNP26678 52 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 NMUP48645 174 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 RHOHQ15669 191 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 ZNF876PQ49A33 203 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 FAM159AQ6UWV7 190 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 SMIM15Q7Z3B0 74 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 TRPT1Q86TN4 253 aaKnown RBP3.23□□□□□ -1.89
PABPC1-212ENST00000519622 NFE4Q86UQ8 179 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 C1orf158Q8N1D5 194 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 DNAH3Q8TD57 4116 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 DEFB104AQ8WTQ1 72 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 ZNF479Q96JC4 524 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 SCGB3A1Q96QR1 104 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 OPRPNQ99935 248 aaPredicted RBP3.23□□□□□ -1.89
PABPC1-212ENST00000519622 CST9LQ9H4G1 147 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 C16orf95Q9H693 158 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 TP53TG1Q9Y2A0 90 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 CHTOPQ9Y3Y2 248 aaKnown RBP3.23□□□□□ -1.89
PABPC1-212ENST00000519622 UNC79Q9P2D8 2635 aa3.23□□□□□ -1.89
PABPC1-212ENST00000519622 IGLV4-3A0A075B6K6 122 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.22□□□□□ -1.89
PABPC1-212ENST00000519622 PRSS1P07477 247 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 ZNF22P17026 224 aaPredicted RBP3.22□□□□□ -1.89
PABPC1-212ENST00000519622 AZU1P20160 251 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 UBE2D1P51668 147 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 SNRPD3P62318 126 aaKnown RBP3.22□□□□□ -1.89
PABPC1-212ENST00000519622 CEND1Q8N111 149 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 C20orf203Q8NBC4 194 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 OR11H1Q8NG94 326 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 PRO0461Q9UI25 63 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 CYSLTR1Q9Y271 337 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
PABPC1-212ENST00000519622 IGHV4-28A0A0C4DH34 117 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 A0A0J9YY99 117 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 MYMXA0A1B0GTQ4 84 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 A0A1W2PPM0 123 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 TMEM223A0PJW6 202 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 VCYO14598 125 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 RS1O15537 224 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 PPP1R17O96001 155 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 EMP1P54849 157 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 PMVKQ15126 192 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 TAL2Q16559 108 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 CFAP126Q5VTH2 177 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 SBSPONQ8IVN8 264 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 KLHL30-AS1Q8NEE0 82 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 SPATA3Q8NHX4 192 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 LINC01006Q8NI28 216 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 TMEM141Q96I45 108 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 LITAFQ99732 161 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 SORL1Q92673 2214 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 NIPBLQ6KC79 2804 aaeCLIP3.21□□□□□ -1.91e-8■□□□□ 9.7
PABPC1-212ENST00000519622 TLN2Q9Y4G6 2542 aa3.21□□□□□ -1.9
PABPC1-212ENST00000519622 NF1P21359 2839 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 SONP18583 2426 aaKnown RBP3.2□□□□□ -1.9
PABPC1-212ENST00000519622 MYO9AB2RTY4 2548 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 ITPR2Q14571 2701 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 TRAV25A0A0B4J276 109 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 IGLL5B9A064 214 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 H3BUT2 72 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 IGHV3-53P01767 116 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 LINC00694P0DN24 101 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 ZNF56Q15929 161 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 C12orf74Q32Q52 190 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 FAM74A4Q5TZK3 123 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 C10orf126Q8N4M7 172 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-212ENST00000519622 CSNK1G2-AS1Q8NCQ2 148 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 CITED2Q99967 270 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-212ENST00000519622 WFDC10AQ9H1F0 79 aa3.2□□□□□ -1.9
PABPC1-212ENST00000519622 MRPL16Q9NX20 251 aaKnown RBP3.2□□□□□ -1.9
PABPC1-212ENST00000519622 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms