RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
CTNNA1-214ENST00000519116 HIST1H2BAQ96A08 127 aa3.89□□□□□ -1.79
CTNNA1-214ENST00000519116 SDHCQ99643 169 aaPredicted RBP3.89□□□□□ -1.79
CTNNA1-214ENST00000519116 MED28Q9H204 178 aa3.89□□□□□ -1.79
CTNNA1-214ENST00000519116 IGKV3OR2-268A0A0C4DH90 116 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 LOC107984640A0A0U1RRK4 108 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 A0A1W2PNN7 141 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 PLA2G10O15496 165 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 CXCL1P09341 107 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 RPL12P30050 165 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 GAGE2BQ13066 116 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 SPANXN1Q5VSR9 72 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 OR10AG1Q8NH19 301 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 PGLYRP4Q96LB8 373 aa3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 NKX6-2Q9C056 277 aaPredicted RBP3.88□□□□□ -1.79
CTNNA1-214ENST00000519116 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 M0QY20 66 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 SNAI2O43623 268 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 SIX6O95475 246 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 MBP02144 154 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 OR5AL1P0C617 328 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 PET100P0DJ07 73 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 FGF6P10767 208 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 UBE2G1P62253 170 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 EIF5AP63241 154 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 SYCNQ0VAF6 134 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 FOXI1Q12951 378 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 PPP1R1CQ8WVI7 109 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 ISOC2Q96AB3 205 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 FMC1Q96HJ9 113 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 AP1S3Q96PC3 154 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 WFDC1Q9HC57 220 aa3.87□□□□□ -1.79
CTNNA1-214ENST00000519116 MUC21A0A140T8X8 626 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 ZNF561-AS1K7EIQ3 104 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 LTAP01374 205 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 KRTAP1-4P0C5Y4 121 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 NKX2-5P52952 324 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 COTL1Q14019 142 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 C9orf116Q5BN46 136 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 TSKUQ8WUA8 353 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 LINC00526Q96FQ7 95 aa3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 ACTR3CQ9C0K3 210 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 CARHSP1Q9Y2V2 147 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-214ENST00000519116 A0A087WZ39 114 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 FAM240BA0A1B0GVZ2 78 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 CCDC160A6NGH7 325 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 MPC2O95563 127 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 TSPAN13O95857 204 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 MGPP08493 103 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 XCL1P47992 114 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 CAMPP49913 170 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 UBE2G2P60604 165 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 SSTP61278 116 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 SERF2P84101 59 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 AMMECR1LQ6DCA0 310 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 SUMO4Q6EEV6 95 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 RASL11AQ6T310 242 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 PHF5AQ7RTV0 110 aaKnown RBP3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 PSMG3Q9BT73 122 aaPredicted RBP3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 MLST8Q9BVC4 326 aa3.85□□□□□ -1.79
CTNNA1-214ENST00000519116 FAM74A7A6NL05 159 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 APOMO95445 188 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 ATP6V0CP27449 155 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 DEFA3P59666 94 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 ANAPC16Q96DE5 110 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 TCEAL7Q9BRU2 100 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 CDIP1Q9H305 208 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 NIT2Q9NQR4 276 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 TNFSF18Q9UNG2 199 aa3.84□□□□□ -1.79
CTNNA1-214ENST00000519116 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.8
CTNNA1-214ENST00000519116 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 H7C423 109 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 CCL25O15444 150 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 BCL2P10415 239 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 H2BFSP57053 126 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 RPL18AQ02543 176 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 RNASEKQ6P5S7 137 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 OR5A1Q8NGJ0 315 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 CCDC32Q9BV29 185 aa3.83□□□□□ -1.8
CTNNA1-214ENST00000519116 CTXND1A0A1B0GTU2 59 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 LINC00959A0A1B0GUT2 108 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 NCR2O95944 276 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 S100A9P06702 114 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 ZNF25P17030 456 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 AKR1C3P42330 323 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 FHITP49789 147 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 MEF2BQ02080 365 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 EIF5AL1Q6IS14 154 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 MZT2BQ6NZ67 158 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 CD164L2Q6UWJ8 174 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 NUP35Q8NFH5 326 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 NUDT10Q8NFP7 164 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 STOML3Q8TAV4 291 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 NUDT11Q96G61 164 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 CAMK2N2Q96S95 79 aa3.82□□□□□ -1.8
CTNNA1-214ENST00000519116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-214ENST00000519116 IGKV2-29A2NJV5 120 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms