RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 DOCK2Q92608 1830 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 RBAKDNA6NC62 111 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 A6NIN4 97 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 C8orf59Q8N0T1 100 aaPredicted RBP0.52□□□□□ -2.33
SQLE-202ENST00000518604 WFDC6Q9BQY6 131 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 CNTLNQ9NXG0 1405 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 GOLGA3Q08378 1498 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 SHANK2Q9UPX8 1470 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 ARHGAP5Q13017 1502 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 TOPAZ1Q8N9V7 1692 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 IFT172Q9UG01 1749 aa0.52□□□□□ -2.33
SQLE-202ENST00000518604 GVQW2A0A096LPI5 108 aaPredicted RBP0.51□□□□□ -2.33
SQLE-202ENST00000518604 TRGV1A0A0A0MS02 117 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 ABCC5O15440 1437 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 SPINK8P0C7L1 97 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 IFITM1P13164 125 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 SPINT3P49223 89 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 MYOM1P52179 1685 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 CCL18P55774 89 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 PSME4Q14997 1843 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 ABCC10Q5T3U5 1492 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 Q5VV11 94 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 NAV3Q8IVL0 2385 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 CCNB3Q8WWL7 1395 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 ABCA3Q99758 1704 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 SCAPERQ9BY12 1400 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 PLAC8Q9NZF1 115 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 FRAS1Q86XX4 4008 aa0.51□□□□□ -2.33
SQLE-202ENST00000518604 PI4KAP42356 2102 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
SQLE-202ENST00000518604 ZNF236Q9UL36 1845 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 COL4A6Q14031 1691 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 TRAV30A0A087WSZ9 112 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 UBE2L5PA0A1B0GUS4 154 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 SSSCA1O60232 199 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 MPC2O95563 127 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 PRH1P02810 166 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 ZNF137PP52743 207 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 UBE2L3P68036 154 aaKnown RBP0.5□□□□□ -2.33
SQLE-202ENST00000518604 SPINK13Q1W4C9 94 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 TTC9CQ8N5M4 171 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 FAM213BQ8TBF2 198 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 CYP4F30PQ9H0H9 118 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 NDUFA4L2Q9NRX3 87 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 V9GYV3 84 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 ANK2Q01484 3957 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 MEGF8Q7Z7M0 2845 aa0.5□□□□□ -2.33
SQLE-202ENST00000518604 CDK13Q14004 1512 aaKnown RBP0.49□□□□□ -2.33
SQLE-202ENST00000518604 TRBV7-3A0A075B6L6 115 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 TMEM218A2RU14 115 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 TMEM262E9PQX1 116 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 G3V318 75 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 C10orf128Q5T292 105 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 FAM74A4Q5TZK3 123 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 GTF2H5Q6ZYL4 71 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 SVBPQ8N300 66 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 AMELXQ99217 191 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 SMR3AQ99954 134 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 LENEPQ9Y5L5 61 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 ANKRD26Q9UPS8 1709 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 MYO7AQ13402 2215 aa0.49□□□□□ -2.33
SQLE-202ENST00000518604 CADP27708 2225 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 C10orf142B7Z368 130 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 ATP5EP56381 51 aaPredicted RBP0.48□□□□□ -2.33
SQLE-202ENST00000518604 NCMAPQ5T1S8 102 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 C6orf52Q5T4I8 152 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 ACBD7Q8N6N7 88 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 PPP1R1CQ8WVI7 109 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 FAM103A1Q9BTL3 118 aaKnown RBP0.48□□□□□ -2.33
SQLE-202ENST00000518604 CACNA1HO95180 2353 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 ASXL3Q9C0F0 2248 aa0.48□□□□□ -2.33
SQLE-202ENST00000518604 ZNF609O15014 1411 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 AKAP12Q02952 1782 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 SCN7AQ01118 1682 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 TRAV1-2A0A0B4J238 106 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 TRAV22A0A0B4J277 110 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 FAM24AA6NFZ4 105 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 PPP1R17O96001 155 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 MT-ATP8P03928 68 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 SPINK7P58062 85 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 UBE2D3P61077 147 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 UBE2D2P62837 147 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 DCDP81605 110 aaKnown RBP0.47□□□□□ -2.33
SQLE-202ENST00000518604 VMO1Q7Z5L0 202 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 AQP10Q96PS8 301 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 LINC00472Q9H8W2 130 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 CDC42SE2Q9NRR3 84 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 SMARCA2P51531 1590 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 DIP2CQ9Y2E4 1556 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 LAMC3Q9Y6N6 1575 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 HMGXB3Q12766 1538 aa0.47□□□□□ -2.33
SQLE-202ENST00000518604 LAMC1P11047 1609 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 APCP25054 2843 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 PIGBOS1A0A0B4J2F0 54 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 hADV29S1A0JD25 119 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 TMEM14DPA8MWL7 114 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
SQLE-202ENST00000518604 H3BQ15 152 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms