RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 DEFB131AP59861 70 aa18.3■□□□□ 0.52
SNTB1-202ENST00000517992 IGLV4-3A0A075B6K6 122 aa18.29■□□□□ 0.52
SNTB1-202ENST00000517992 SLURP1P55000 103 aa18.29■□□□□ 0.52
SNTB1-202ENST00000517992 NDUFA11Q86Y39 141 aa18.29■□□□□ 0.52
SNTB1-202ENST00000517992 DLX4Q92988 240 aaPredicted RBP18.29■□□□□ 0.52
SNTB1-202ENST00000517992 OPRPNQ99935 248 aaPredicted RBP18.29■□□□□ 0.52
SNTB1-202ENST00000517992 PEMTQ9UBM1 199 aa18.29■□□□□ 0.52
SNTB1-202ENST00000517992 A8MWV9 139 aa18.28■□□□□ 0.52
SNTB1-202ENST00000517992 ZNF22P17026 224 aaPredicted RBP18.28■□□□□ 0.52
SNTB1-202ENST00000517992 UBE2D3P61077 147 aa18.28■□□□□ 0.52
SNTB1-202ENST00000517992 UBE2D2P62837 147 aa18.28■□□□□ 0.52
SNTB1-202ENST00000517992 SMAGPQ0VAQ4 97 aa18.28■□□□□ 0.52
SNTB1-202ENST00000517992 GEMIN7Q9H840 131 aaKnown RBP18.28■□□□□ 0.52
SNTB1-202ENST00000517992 VCX2Q9H322 139 aa18.28■□□□□ 0.52
SNTB1-202ENST00000517992 RHODO00212 210 aa18.27■□□□□ 0.52
SNTB1-202ENST00000517992 M0R2P5 195 aa18.26■□□□□ 0.51
SNTB1-202ENST00000517992 KRTAP1-1Q07627 177 aa18.26■□□□□ 0.51
SNTB1-202ENST00000517992 A4D1N5 150 aa18.26■□□□□ 0.51
SNTB1-202ENST00000517992 RBMY1BA6NDE4 496 aaKnown RBP18.26■□□□□ 0.51
SNTB1-202ENST00000517992 RBMY1EA6NEQ0 496 aaKnown RBP18.26■□□□□ 0.51
SNTB1-202ENST00000517992 RBMY1DP0C7P1 496 aaKnown RBP18.26■□□□□ 0.51
SNTB1-202ENST00000517992 LINC00467Q9BRT7 94 aa18.26■□□□□ 0.51
SNTB1-202ENST00000517992 ZNF415Q09FC8 603 aa18.25■□□□□ 0.51
SNTB1-202ENST00000517992 ETDBQ3ZM63 59 aa18.25■□□□□ 0.51
SNTB1-202ENST00000517992 C4orf3Q8WVX3 66 aa18.25■□□□□ 0.51
SNTB1-202ENST00000517992 APOMO95445 188 aa18.24■□□□□ 0.51
SNTB1-202ENST00000517992 DEFB136Q30KP8 78 aa18.24■□□□□ 0.51
SNTB1-202ENST00000517992 C18orf65Q6ZTR6 163 aa18.24■□□□□ 0.51
SNTB1-202ENST00000517992 SMR3AQ99954 134 aa18.24■□□□□ 0.51
SNTB1-202ENST00000517992 YAE1D1Q9NRH1 226 aa18.24■□□□□ 0.51
SNTB1-202ENST00000517992 DUX3Q96PT4 197 aa18.24■□□□□ 0.51
SNTB1-202ENST00000517992 CFAP126Q5VTH2 177 aa18.23■□□□□ 0.51
SNTB1-202ENST00000517992 GTSF1LQ9H1H1 148 aa18.23■□□□□ 0.51
SNTB1-202ENST00000517992 CFC1BP0CG36 223 aa18.23■□□□□ 0.51
SNTB1-202ENST00000517992 CFC1P0CG37 223 aa18.23■□□□□ 0.51
SNTB1-202ENST00000517992 SH2D6Q7Z4S9 175 aa18.23■□□□□ 0.51
SNTB1-202ENST00000517992 TMEM61Q8N0U2 210 aa18.23■□□□□ 0.51
SNTB1-202ENST00000517992 SONP18583 2426 aaKnown RBP18.23■□□□□ 0.51
SNTB1-202ENST00000517992 A0A0J9YXV3 536 aa18.22■□□□□ 0.51
SNTB1-202ENST00000517992 C10orf126Q8N4M7 172 aa18.22■□□□□ 0.51
SNTB1-202ENST00000517992 ATP6V0E2Q8NHE4 81 aa18.22■□□□□ 0.51
SNTB1-202ENST00000517992 LOC107984156A0A0G2JMH3 177 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 CD28P10747 220 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 ARL17AQ8IVW1 177 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 MAP6D1Q9H9H5 199 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 SS18L2Q9UHA2 77 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 MXRA5Q9NR99 2828 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 HIVEP1P15822 2718 aa18.2■□□□□ 0.5
SNTB1-202ENST00000517992 MRPS36P82909 103 aaKnown RBP18.2■□□□□ 0.5
SNTB1-202ENST00000517992 TRBV20-1A0A075B6N2 111 aa18.19■□□□□ 0.5
SNTB1-202ENST00000517992 HTN1P15515 57 aa18.19■□□□□ 0.5
SNTB1-202ENST00000517992 FAM104AQ969W3 186 aa18.19■□□□□ 0.5
SNTB1-202ENST00000517992 PRO1854Q9UHT4 67 aa18.19■□□□□ 0.5
SNTB1-202ENST00000517992 RAX2Q96IS3 184 aa18.18■□□□□ 0.5
SNTB1-202ENST00000517992 SPANXA1Q9NS26 97 aa18.18■□□□□ 0.5
SNTB1-202ENST00000517992 IGHV3-73A0A0B4J1V6 119 aa18.18■□□□□ 0.5
SNTB1-202ENST00000517992 PROK1P58294 105 aa18.18■□□□□ 0.5
SNTB1-202ENST00000517992 DYNLRB2Q8TF09 96 aa18.18■□□□□ 0.5
SNTB1-202ENST00000517992 SPATA25Q9BR10 227 aa18.18■□□□□ 0.5
SNTB1-202ENST00000517992 PSMB2P49721 201 aa18.17■□□□□ 0.5
SNTB1-202ENST00000517992 DNAJC30Q96LL9 226 aa18.17■□□□□ 0.5
SNTB1-202ENST00000517992 TSSC4Q9Y5U2 329 aaPredicted RBP18.17■□□□□ 0.5
SNTB1-202ENST00000517992 C11orf72Q8NBR9 251 aa18.16■□□□□ 0.5
SNTB1-202ENST00000517992 C1QTNF4Q9BXJ3 329 aa18.16■□□□□ 0.5
SNTB1-202ENST00000517992 SMCPP49901 116 aaPredicted RBP18.16■□□□□ 0.5
SNTB1-202ENST00000517992 BEAN1Q3B7T3 259 aa18.16■□□□□ 0.5
SNTB1-202ENST00000517992 ANK3Q12955 4377 aaKnown RBP18.15■□□□□ 0.5
SNTB1-202ENST00000517992 A0A0B4J2C4 111 aa18.15■□□□□ 0.5
SNTB1-202ENST00000517992 GAGE12HA6NDE8 117 aa18.15■□□□□ 0.5
SNTB1-202ENST00000517992 INSP01308 110 aa18.15■□□□□ 0.5
SNTB1-202ENST00000517992 DEFB114Q30KQ6 69 aa18.15■□□□□ 0.5
SNTB1-202ENST00000517992 TMEM86BQ8N661 226 aa18.15■□□□□ 0.5
SNTB1-202ENST00000517992 CHCHD7Q9BUK0 85 aa18.14■□□□□ 0.49
SNTB1-202ENST00000517992 IGHV3-53P01767 116 aa18.14■□□□□ 0.49
SNTB1-202ENST00000517992 TIMM21Q9BVV7 248 aa18.14■□□□□ 0.49
SNTB1-202ENST00000517992 IGHV3-30-3P0DP02 117 aa18.13■□□□□ 0.49
SNTB1-202ENST00000517992 LINC01587Q99440 93 aa18.13■□□□□ 0.49
SNTB1-202ENST00000517992 LY6G6DO95868 133 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 Q6ZSN1 163 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 SORL1Q92673 2214 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 A0A0J9YXY3 114 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 TINCRA0A1B0GVN0 87 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 UBE2D4Q9Y2X8 147 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 NACAE9PAV3 2078 aa18.12■□□□□ 0.49
SNTB1-202ENST00000517992 IGHV3-64A0A075B6Q5 118 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.11■□□□□ 0.49
SNTB1-202ENST00000517992 TCL1BO95988 128 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 SBSPONQ8IVN8 264 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 TMEM263Q8WUH6 116 aaKnown RBP18.11■□□□□ 0.49
SNTB1-202ENST00000517992 RS1O15537 224 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 FOXI1Q12951 378 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 KHDC1LQ5JSQ8 128 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 SFTA2Q6UW10 78 aa18.11■□□□□ 0.49
SNTB1-202ENST00000517992 IGHV1-58A0A0C4DH39 117 aa18.1■□□□□ 0.49
SNTB1-202ENST00000517992 PRM2P04554 102 aa18.1■□□□□ 0.49
SNTB1-202ENST00000517992 TRAV25A0A0B4J276 109 aa18.09■□□□□ 0.49
SNTB1-202ENST00000517992 IGHV3-33P01772 117 aa18.09■□□□□ 0.49
SNTB1-202ENST00000517992 MUSTN1Q8IVN3 82 aa18.09■□□□□ 0.49
SNTB1-202ENST00000517992 CUBNO60494 3623 aa18.09■□□□□ 0.49
SNTB1-202ENST00000517992 EIF4EBP3O60516 100 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms