RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 OR2D3Q8NGH3 330 aa9.58□□□□□ -0.88
CSGALNACT1-204ENST00000517494 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
CSGALNACT1-204ENST00000517494 LINC01600Q96MT4 127 aa9.58□□□□□ -0.88
CSGALNACT1-204ENST00000517494 CACNG7P62955 275 aa9.57□□□□□ -0.88
CSGALNACT1-204ENST00000517494 COTL1Q14019 142 aa9.57□□□□□ -0.88
CSGALNACT1-204ENST00000517494 G3V3Q6 166 aa9.56□□□□□ -0.88
CSGALNACT1-204ENST00000517494 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
CSGALNACT1-204ENST00000517494 MBD3L1Q8WWY6 194 aa9.56□□□□□ -0.88
CSGALNACT1-204ENST00000517494 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
CSGALNACT1-204ENST00000517494 SMLR1H3BR10 107 aa9.55□□□□□ -0.88
CSGALNACT1-204ENST00000517494 TRGC1P0CF51 173 aa9.55□□□□□ -0.88
CSGALNACT1-204ENST00000517494 RPS20P60866 119 aaKnown RBP9.55□□□□□ -0.88
CSGALNACT1-204ENST00000517494 CENPWQ5EE01 88 aa9.55□□□□□ -0.88
CSGALNACT1-204ENST00000517494 AMMECR1LQ6DCA0 310 aa9.55□□□□□ -0.88
CSGALNACT1-204ENST00000517494 NIT2Q9NQR4 276 aa9.55□□□□□ -0.88
CSGALNACT1-204ENST00000517494 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
CSGALNACT1-204ENST00000517494 H2AFB1P0C5Y9 115 aa9.54□□□□□ -0.88
CSGALNACT1-204ENST00000517494 RNASEKQ6P5S7 137 aaKnown RBP9.54□□□□□ -0.88
CSGALNACT1-204ENST00000517494 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
CSGALNACT1-204ENST00000517494 A0A096LNI7 61 aa9.53□□□□□ -0.88
CSGALNACT1-204ENST00000517494 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
CSGALNACT1-204ENST00000517494 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
CSGALNACT1-204ENST00000517494 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
CSGALNACT1-204ENST00000517494 XKRY2A2RUG3 117 aa9.52□□□□□ -0.89
CSGALNACT1-204ENST00000517494 IFNA1P01562 189 aa9.52□□□□□ -0.89
CSGALNACT1-204ENST00000517494 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
CSGALNACT1-204ENST00000517494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.51□□□□□ -0.89
CSGALNACT1-204ENST00000517494 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
CSGALNACT1-204ENST00000517494 IGKV2-29A2NJV5 120 aaPredicted RBP9.51□□□□□ -0.89
CSGALNACT1-204ENST00000517494 F2Z2F3 143 aa9.51□□□□□ -0.89
CSGALNACT1-204ENST00000517494 NTF3P20783 257 aa9.51□□□□□ -0.89
CSGALNACT1-204ENST00000517494 GNG4P50150 75 aa9.51□□□□□ -0.89
CSGALNACT1-204ENST00000517494 GVQW2A0A096LPI5 108 aaPredicted RBP9.5□□□□□ -0.89
CSGALNACT1-204ENST00000517494 RAB19A4D1S5 217 aa9.5□□□□□ -0.89
CSGALNACT1-204ENST00000517494 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
CSGALNACT1-204ENST00000517494 C11orf52Q96A22 123 aa9.5□□□□□ -0.89
CSGALNACT1-204ENST00000517494 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
CSGALNACT1-204ENST00000517494 MANBALQ9NQG1 85 aa9.5□□□□□ -0.89
CSGALNACT1-204ENST00000517494 C19orf71A6NCJ1 209 aa9.49□□□□□ -0.89
CSGALNACT1-204ENST00000517494 XCL1P47992 114 aa9.49□□□□□ -0.89
CSGALNACT1-204ENST00000517494 CCL20P78556 96 aa9.49□□□□□ -0.89
CSGALNACT1-204ENST00000517494 TWIST1Q15672 202 aa9.49□□□□□ -0.89
CSGALNACT1-204ENST00000517494 Q6ZNX1 250 aa9.49□□□□□ -0.89
CSGALNACT1-204ENST00000517494 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
CSGALNACT1-204ENST00000517494 KANTRA0A1W2PQU2 76 aa9.48□□□□□ -0.89
CSGALNACT1-204ENST00000517494 APCSP02743 223 aa9.48□□□□□ -0.89
CSGALNACT1-204ENST00000517494 ZNF345Q14585 488 aa9.48□□□□□ -0.89
CSGALNACT1-204ENST00000517494 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
CSGALNACT1-204ENST00000517494 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
CSGALNACT1-204ENST00000517494 BCL2L11O43521 198 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 FGF6P10767 208 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 FOXI1Q12951 378 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 Q6ZRP5 223 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
CSGALNACT1-204ENST00000517494 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
CSGALNACT1-204ENST00000517494 CCL25O15444 150 aa9.45□□□□□ -0.9
CSGALNACT1-204ENST00000517494 CTRLP40313 264 aa9.45□□□□□ -0.9
CSGALNACT1-204ENST00000517494 BTF3L4Q96K17 158 aa9.45□□□□□ -0.9
CSGALNACT1-204ENST00000517494 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
CSGALNACT1-204ENST00000517494 IGHV1-58A0A0C4DH39 117 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 NCR2O95944 276 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 EIF5AP63241 154 aaKnown RBP9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 C9orf62Q8N4C0 152 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 TMEM101Q96IK0 257 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
CSGALNACT1-204ENST00000517494 TRBV20OR9-2A0A075B6H5 130 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 H7C423 109 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 GAGE2BQ13066 116 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 SMIM15Q7Z3B0 74 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
CSGALNACT1-204ENST00000517494 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 TEX46H3BTG2 121 aa9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 PDE6DO43924 150 aa9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 ZNF25P17030 456 aaPredicted RBP9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 PMCHP20382 165 aa9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 FOXA3P55318 350 aaPredicted RBP9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 SRSF9Q13242 221 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 RPP21Q9H633 154 aaKnown RBP9.42□□□□□ -0.9
CSGALNACT1-204ENST00000517494 RGS21Q2M5E4 152 aa9.41□□□□□ -0.9
CSGALNACT1-204ENST00000517494 RNASE7Q9H1E1 156 aaKnown RBP9.41□□□□□ -0.9
CSGALNACT1-204ENST00000517494 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
CSGALNACT1-204ENST00000517494 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
CSGALNACT1-204ENST00000517494 SS18Q15532 418 aa9.4□□□□□ -0.9
CSGALNACT1-204ENST00000517494 CNFNQ9BYD5 112 aa9.4□□□□□ -0.9
CSGALNACT1-204ENST00000517494 BATF3Q9NR55 127 aa9.4□□□□□ -0.9
CSGALNACT1-204ENST00000517494 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
CSGALNACT1-204ENST00000517494 I3L3M4 83 aa9.39□□□□□ -0.91
CSGALNACT1-204ENST00000517494 CAMPP49913 170 aa9.39□□□□□ -0.91
CSGALNACT1-204ENST00000517494 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
CSGALNACT1-204ENST00000517494 LPAP08519 4548 aa9.38□□□□□ -0.91
CSGALNACT1-204ENST00000517494 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms