RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ATP6V1G1O75348 118 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 GAGE6Q13070 117 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
VEGFA-216ENST00000512683 WDR73Q6P4I2 378 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 ALKAL2Q6UX46 152 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 LINC00269Q8N2A0 174 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 LYPD6BQ8NI32 183 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 CNFNQ9BYD5 112 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
VEGFA-216ENST00000512683 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
VEGFA-216ENST00000512683 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
VEGFA-216ENST00000512683 HLA-DQA1P01909 254 aa8.07□□□□□ -1.12
VEGFA-216ENST00000512683 TRGC1P0CF51 173 aa8.07□□□□□ -1.12
VEGFA-216ENST00000512683 NKX2-5P52952 324 aaPredicted RBP8.07□□□□□ -1.12
VEGFA-216ENST00000512683 RASL11AQ6T310 242 aa8.07□□□□□ -1.12
VEGFA-216ENST00000512683 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
VEGFA-216ENST00000512683 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
VEGFA-216ENST00000512683 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
VEGFA-216ENST00000512683 RPP21Q9H633 154 aaKnown RBP8.06□□□□□ -1.12
VEGFA-216ENST00000512683 NIT2Q9NQR4 276 aa8.06□□□□□ -1.12
VEGFA-216ENST00000512683 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
VEGFA-216ENST00000512683 TMEM250H0YL14 139 aa8.05□□□□□ -1.12
VEGFA-216ENST00000512683 BLOC1S1P78537 153 aa8.05□□□□□ -1.12
VEGFA-216ENST00000512683 REG3AQ06141 175 aa8.05□□□□□ -1.12
VEGFA-216ENST00000512683 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
VEGFA-216ENST00000512683 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
VEGFA-216ENST00000512683 TWIST1Q15672 202 aa8.04□□□□□ -1.12
VEGFA-216ENST00000512683 CFAP161Q6P656 301 aa8.04□□□□□ -1.12
VEGFA-216ENST00000512683 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
VEGFA-216ENST00000512683 PGLYRP4Q96LB8 373 aa8.04□□□□□ -1.12
VEGFA-216ENST00000512683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-216ENST00000512683 UBR4Q5T4S7 5183 aa8.04□□□□□ -1.12
VEGFA-216ENST00000512683 IGLV4-60A0A075B6I1 120 aa8.03□□□□□ -1.12
VEGFA-216ENST00000512683 hDV102S1A0JD36 115 aa8.03□□□□□ -1.12
VEGFA-216ENST00000512683 FOXA3P55318 350 aaPredicted RBP8.03□□□□□ -1.12
VEGFA-216ENST00000512683 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
VEGFA-216ENST00000512683 DPH3Q96FX2 82 aa8.03□□□□□ -1.12
VEGFA-216ENST00000512683 TMEM243Q9BU79 118 aa8.03□□□□□ -1.12
VEGFA-216ENST00000512683 GFRA4Q9GZZ7 299 aa8.03□□□□□ -1.12
VEGFA-216ENST00000512683 TRAV26-2A0A0B4J265 109 aa8.02□□□□□ -1.13
VEGFA-216ENST00000512683 HNRNPA3P51991 378 aaKnown RBP8.02□□□□□ -1.13
VEGFA-216ENST00000512683 IFITM2Q01629 132 aa8.02□□□□□ -1.13
VEGFA-216ENST00000512683 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
VEGFA-216ENST00000512683 IGLV10-54A0A075B6I4 117 aa8.01□□□□□ -1.13
VEGFA-216ENST00000512683 GATCO43716 136 aaKnown RBP8.01□□□□□ -1.13
VEGFA-216ENST00000512683 MT1HL1P0DM35 61 aa8.01□□□□□ -1.13
VEGFA-216ENST00000512683 A8MWL6 223 aa8□□□□□ -1.13
VEGFA-216ENST00000512683 PANO1I0J062 215 aa8□□□□□ -1.13
VEGFA-216ENST00000512683 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
VEGFA-216ENST00000512683 PLAC8Q9NZF1 115 aa8□□□□□ -1.13
VEGFA-216ENST00000512683 A0A087WYN8 130 aa7.99□□□□□ -1.13
VEGFA-216ENST00000512683 UBE2L6O14933 153 aa7.99□□□□□ -1.13
VEGFA-216ENST00000512683 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
VEGFA-216ENST00000512683 AMTP48728 403 aa7.99□□□□□ -1.13
VEGFA-216ENST00000512683 CEBPGP53567 150 aa7.99□□□□□ -1.13
VEGFA-216ENST00000512683 COTL1Q14019 142 aa7.99□□□□□ -1.13
VEGFA-216ENST00000512683 C7orf33Q8WU49 177 aa7.99□□□□□ -1.13
VEGFA-216ENST00000512683 H7C423 109 aa7.98□□□□□ -1.13
VEGFA-216ENST00000512683 SRP19P09132 144 aaKnown RBP7.98□□□□□ -1.13
VEGFA-216ENST00000512683 CT83Q5H943 113 aa7.98□□□□□ -1.13
VEGFA-216ENST00000512683 LINC01551Q86U37 167 aa7.98□□□□□ -1.13
VEGFA-216ENST00000512683 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
VEGFA-216ENST00000512683 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
VEGFA-216ENST00000512683 EIF5A2Q9GZV4 153 aaKnown RBP7.98□□□□□ -1.13
VEGFA-216ENST00000512683 GAS8-AS1O95177 125 aa7.97□□□□□ -1.13
VEGFA-216ENST00000512683 SLPIP03973 132 aa7.97□□□□□ -1.13
VEGFA-216ENST00000512683 RPS10P46783 165 aaKnown RBP7.97□□□□□ -1.13
VEGFA-216ENST00000512683 SMIM15Q7Z3B0 74 aa7.97□□□□□ -1.13
VEGFA-216ENST00000512683 PKIGQ9Y2B9 76 aa7.97□□□□□ -1.13
VEGFA-216ENST00000512683 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.14
VEGFA-216ENST00000512683 ZNF727A8MUV8 499 aa7.96□□□□□ -1.14
VEGFA-216ENST00000512683 NCR2O95944 276 aa7.96□□□□□ -1.14
VEGFA-216ENST00000512683 TEX261Q6UWH6 196 aa7.96□□□□□ -1.14
VEGFA-216ENST00000512683 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.14
VEGFA-216ENST00000512683 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
VEGFA-216ENST00000512683 TRBV6-5A0A0K0K1A5 114 aa7.95□□□□□ -1.14
VEGFA-216ENST00000512683 FAM231BA6NCW3 169 aa7.95□□□□□ -1.14
VEGFA-216ENST00000512683 HIGD1CA8MV81 97 aa7.95□□□□□ -1.14
VEGFA-216ENST00000512683 TSKUQ8WUA8 353 aa7.95□□□□□ -1.14
VEGFA-216ENST00000512683 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
VEGFA-216ENST00000512683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
VEGFA-216ENST00000512683 A0A1B0GUT8 65 aa7.94□□□□□ -1.14
VEGFA-216ENST00000512683 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
VEGFA-216ENST00000512683 RAB14P61106 215 aa7.94□□□□□ -1.14
VEGFA-216ENST00000512683 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
VEGFA-216ENST00000512683 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
VEGFA-216ENST00000512683 TMEM191AQ9H0A3 160 aa7.94□□□□□ -1.14
VEGFA-216ENST00000512683 V9GYV3 84 aa7.94□□□□□ -1.14
VEGFA-216ENST00000512683 GAGE12HA6NDE8 117 aa7.93□□□□□ -1.14
VEGFA-216ENST00000512683 C9JQL5 133 aa7.93□□□□□ -1.14
VEGFA-216ENST00000512683 I3L3M4 83 aa7.93□□□□□ -1.14
VEGFA-216ENST00000512683 RAB4AP20338 218 aa7.93□□□□□ -1.14
VEGFA-216ENST00000512683 TSHBP01222 138 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 APCSP02743 223 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 FGF6P10767 208 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 ESDP10768 282 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 PMCHP20382 165 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
VEGFA-216ENST00000512683 COX6A2Q02221 97 aa7.92□□□□□ -1.14
VEGFA-216ENST00000512683 AMMECR1LQ6DCA0 310 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms