RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 V9GYV3 84 aa8.71□□□□□ -1.02
RNF4-215ENST00000511843 IGLV10-54A0A075B6I4 117 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 NDUFS6O75380 124 aaKnown RBP8.7□□□□□ -1.02
RNF4-215ENST00000511843 RPL23P62829 140 aaKnown RBP8.7□□□□□ -1.02
RNF4-215ENST00000511843 COTL1Q14019 142 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 TMEM241Q24JQ0 296 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 SMIM15Q7Z3B0 74 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 ISOC2Q96AB3 205 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 OSTCQ9NRP0 149 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 PRR34Q9NV39 138 aa8.7□□□□□ -1.02
RNF4-215ENST00000511843 USP17L23D6RBM5 183 aa8.69□□□□□ -1.02
RNF4-215ENST00000511843 REG3AQ06141 175 aa8.69□□□□□ -1.02
RNF4-215ENST00000511843 ADIRFQ15847 76 aa8.69□□□□□ -1.02
RNF4-215ENST00000511843 MIAQ16674 131 aa8.69□□□□□ -1.02
RNF4-215ENST00000511843 Q5VSD8 79 aa8.69□□□□□ -1.02
RNF4-215ENST00000511843 BORCS7Q96B45 105 aa8.69□□□□□ -1.02
RNF4-215ENST00000511843 FAT1Q14517 4588 aa8.68□□□□□ -1.02
RNF4-215ENST00000511843 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
RNF4-215ENST00000511843 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
RNF4-215ENST00000511843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.67□□□□□ -1.02
RNF4-215ENST00000511843 IGKV2-29A2NJV5 120 aaPredicted RBP8.67□□□□□ -1.02
RNF4-215ENST00000511843 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 UBE2L6O14933 153 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 PEA15Q15121 130 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 AMN1Q8IY45 258 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 NUP35Q8NFH5 326 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 RNF185Q96GF1 192 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 NAT8Q9UHE5 227 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 DNAH8Q96JB1 4490 aa8.67□□□□□ -1.02
RNF4-215ENST00000511843 IGKV3OR2-268A0A0C4DH90 116 aa8.66□□□□□ -1.02
RNF4-215ENST00000511843 SMKR1H3BMG3 65 aa8.66□□□□□ -1.02
RNF4-215ENST00000511843 NCR2O95944 276 aa8.66□□□□□ -1.02
RNF4-215ENST00000511843 RPS10P46783 165 aaKnown RBP8.66□□□□□ -1.02
RNF4-215ENST00000511843 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
RNF4-215ENST00000511843 Q6ZSA8 131 aa8.66□□□□□ -1.02
RNF4-215ENST00000511843 FRZBQ92765 325 aa8.66□□□□□ -1.02
RNF4-215ENST00000511843 A0A1B0GUV1 79 aa8.65□□□□□ -1.02
RNF4-215ENST00000511843 PRSS1P07477 247 aa8.65□□□□□ -1.02
RNF4-215ENST00000511843 RAB4AP20338 218 aa8.65□□□□□ -1.02
RNF4-215ENST00000511843 TMEM191AQ9H0A3 160 aa8.65□□□□□ -1.02
RNF4-215ENST00000511843 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
RNF4-215ENST00000511843 APCSP02743 223 aa8.64□□□□□ -1.03
RNF4-215ENST00000511843 PMCHP20382 165 aa8.64□□□□□ -1.03
RNF4-215ENST00000511843 RIGQ13278 110 aa8.64□□□□□ -1.03
RNF4-215ENST00000511843 C14orf177Q52M58 125 aa8.64□□□□□ -1.03
RNF4-215ENST00000511843 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
RNF4-215ENST00000511843 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
RNF4-215ENST00000511843 TSHBP01222 138 aa8.63□□□□□ -1.03
RNF4-215ENST00000511843 RNASEKQ6P5S7 137 aaKnown RBP8.63□□□□□ -1.03
RNF4-215ENST00000511843 ST20Q9HBF5 79 aa8.63□□□□□ -1.03
RNF4-215ENST00000511843 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
RNF4-215ENST00000511843 VPS13BQ7Z7G8 4022 aa8.63□□□□□ -1.03
RNF4-215ENST00000511843 SMIM27A0A1W2PRY6 76 aa8.62□□□□□ -1.03
RNF4-215ENST00000511843 I3L3M4 83 aa8.62□□□□□ -1.03
RNF4-215ENST00000511843 FGF6P10767 208 aa8.62□□□□□ -1.03
RNF4-215ENST00000511843 AMMECR1LQ6DCA0 310 aa8.62□□□□□ -1.03
RNF4-215ENST00000511843 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
RNF4-215ENST00000511843 MRAP2Q96G30 205 aa8.62□□□□□ -1.03
RNF4-215ENST00000511843 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
RNF4-215ENST00000511843 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
RNF4-215ENST00000511843 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
RNF4-215ENST00000511843 CAMPP49913 170 aa8.61□□□□□ -1.03
RNF4-215ENST00000511843 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
RNF4-215ENST00000511843 GAGE12HA6NDE8 117 aa8.6□□□□□ -1.03
RNF4-215ENST00000511843 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
RNF4-215ENST00000511843 MRPL54Q6P161 138 aaKnown RBP8.6□□□□□ -1.03
RNF4-215ENST00000511843 NRACQ8N912 160 aa8.6□□□□□ -1.03
RNF4-215ENST00000511843 SMDT1Q9H4I9 107 aa8.6□□□□□ -1.03
RNF4-215ENST00000511843 hDV102S1A0JD36 115 aa8.59□□□□□ -1.03
RNF4-215ENST00000511843 ESDP10768 282 aa8.59□□□□□ -1.03
RNF4-215ENST00000511843 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
RNF4-215ENST00000511843 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
RNF4-215ENST00000511843 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
RNF4-215ENST00000511843 FAM104BQ5XKR9 115 aa8.58□□□□□ -1.04
RNF4-215ENST00000511843 CIRBP-AS1Q8TBR5 109 aa8.58□□□□□ -1.04
RNF4-215ENST00000511843 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
RNF4-215ENST00000511843 H7C423 109 aa8.57□□□□□ -1.04
RNF4-215ENST00000511843 C15orf56Q8N910 161 aa8.57□□□□□ -1.04
RNF4-215ENST00000511843 C9orf163Q8N9P6 203 aa8.57□□□□□ -1.04
RNF4-215ENST00000511843 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
RNF4-215ENST00000511843 PANO1I0J062 215 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 SLPIP03973 132 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 RAB14P61106 215 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
RNF4-215ENST00000511843 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 CLRN3Q8NCR9 226 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 OR5A1Q8NGJ0 315 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 BTF3L4Q96K17 158 aa8.56□□□□□ -1.04
RNF4-215ENST00000511843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.56□□□□□ -1.04
RNF4-215ENST00000511843 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
RNF4-215ENST00000511843 A0A1B0GXF2 115 aa8.55□□□□□ -1.04
RNF4-215ENST00000511843 C7orf77A4D0Y5 90 aa8.55□□□□□ -1.04
RNF4-215ENST00000511843 VCYO14598 125 aa8.55□□□□□ -1.04
RNF4-215ENST00000511843 ZNF25P17030 456 aaPredicted RBP8.55□□□□□ -1.04
RNF4-215ENST00000511843 FCER1GP30273 86 aa8.55□□□□□ -1.04
RNF4-215ENST00000511843 XCL1P47992 114 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms