RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CRYBA4P53673 196 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 PAPPA-AS1Q5QFB9 102 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 PYGO1Q9Y3Y4 419 aa10.76□□□□□ -0.69
SCLT1-209ENST00000511426 IGIPA6NJ69 53 aa10.75□□□□□ -0.69
SCLT1-209ENST00000511426 CDPF1Q6NVV7 123 aa10.75□□□□□ -0.69
SCLT1-209ENST00000511426 TSTD3H0UI37 97 aa10.74□□□□□ -0.69
SCLT1-209ENST00000511426 LINC00694P0DN24 101 aa10.74□□□□□ -0.69
SCLT1-209ENST00000511426 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
SCLT1-209ENST00000511426 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 PKIAP61925 76 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 SPANXA1Q9NS26 97 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 HSBP1L1C9JCN9 74 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 K7EIL1 84 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 ODF1Q14990 250 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 Q9UF83 564 aa10.73□□□□□ -0.69
SCLT1-209ENST00000511426 ANK2Q01484 3957 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 A0A087WX48 190 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 GAGE12JA6NER3 117 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 H0Y8G0 127 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 H7C423 109 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 GAGE1Q13065 139 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 GAGE4Q13068 117 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 GAGE5Q13069 117 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 TM2D3Q9BRN9 247 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 CHCHD7Q9BUK0 85 aa10.72□□□□□ -0.69
SCLT1-209ENST00000511426 PLNP26678 52 aa10.71□□□□□ -0.69
SCLT1-209ENST00000511426 ZNF664Q8N3J9 261 aa10.71□□□□□ -0.69
SCLT1-209ENST00000511426 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
SCLT1-209ENST00000511426 F8VRH5 84 aa10.7□□□□□ -0.7
SCLT1-209ENST00000511426 DEFB4AO15263 64 aa10.7□□□□□ -0.7
SCLT1-209ENST00000511426 SH2D6Q7Z4S9 175 aa10.7□□□□□ -0.7
SCLT1-209ENST00000511426 CELA1Q9UNI1 258 aa10.7□□□□□ -0.7
SCLT1-209ENST00000511426 TRAV26-1A0A087WT03 109 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 DPM2O94777 84 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 RPL39P62891 51 aaKnown RBP10.69□□□□□ -0.7
SCLT1-209ENST00000511426 PMVKQ15126 192 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 PHLDA1Q8WV24 401 aaPredicted RBP10.69□□□□□ -0.7
SCLT1-209ENST00000511426 CSDC2Q9Y534 153 aaKnown RBP10.69□□□□□ -0.7
SCLT1-209ENST00000511426 H3BNG1 76 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 PAX4O43316 350 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 PAM16Q9Y3D7 125 aa10.69□□□□□ -0.7
SCLT1-209ENST00000511426 TRBV25-1A0A075B6N4 114 aa10.68□□□□□ -0.7
SCLT1-209ENST00000511426 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
SCLT1-209ENST00000511426 IGKCP01834 107 aa10.68□□□□□ -0.7
SCLT1-209ENST00000511426 MRPS36P82909 103 aaKnown RBP10.68□□□□□ -0.7
SCLT1-209ENST00000511426 SPATA45Q537H7 98 aa10.68□□□□□ -0.7
SCLT1-209ENST00000511426 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
SCLT1-209ENST00000511426 UBE2D4Q9Y2X8 147 aa10.68□□□□□ -0.7
SCLT1-209ENST00000511426 GYPEP15421 78 aa10.67□□□□□ -0.7
SCLT1-209ENST00000511426 RETNQ9HD89 108 aa10.67□□□□□ -0.7
SCLT1-209ENST00000511426 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
SCLT1-209ENST00000511426 DEFB121Q5J5C9 76 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 ATOH7Q8N100 152 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 ATP6V0E2Q8NHE4 81 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 PRSS29PA6NIE9 313 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 ZNF25P17030 456 aaPredicted RBP10.66□□□□□ -0.7
SCLT1-209ENST00000511426 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 NTM-AS1Q6ZSK4 140 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 VCX2Q9H322 139 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 CST9LQ9H4G1 147 aa10.66□□□□□ -0.7
SCLT1-209ENST00000511426 MRPL35Q9NZE8 188 aaKnown RBP10.66□□□□□ -0.7
SCLT1-209ENST00000511426 F5H768 121 aa10.65□□□□□ -0.7
SCLT1-209ENST00000511426 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
SCLT1-209ENST00000511426 AMELXQ99217 191 aa10.65□□□□□ -0.7
SCLT1-209ENST00000511426 PMCHL2Q9BQD1 86 aa10.65□□□□□ -0.7
SCLT1-209ENST00000511426 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
SCLT1-209ENST00000511426 UBE2L6O14933 153 aa10.63□□□□□ -0.71
SCLT1-209ENST00000511426 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
SCLT1-209ENST00000511426 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
SCLT1-209ENST00000511426 C2orf88Q9BSF0 95 aa10.63□□□□□ -0.71
SCLT1-209ENST00000511426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
SCLT1-209ENST00000511426 A0A0J9YWU9 116 aa10.63□□□□□ -0.71
SCLT1-209ENST00000511426 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
SCLT1-209ENST00000511426 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
SCLT1-209ENST00000511426 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
SCLT1-209ENST00000511426 CMYA5Q8N3K9 4069 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 FGF6P10767 208 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 NFE4Q86UQ8 179 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 C11orf45Q8TAV5 145 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 MIEN1Q9BRT3 115 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 UQCR10Q9UDW1 63 aa10.62□□□□□ -0.71
SCLT1-209ENST00000511426 hDV102S1A0JD36 115 aa10.61□□□□□ -0.71
SCLT1-209ENST00000511426 PCP4L1A6NKN8 68 aa10.61□□□□□ -0.71
SCLT1-209ENST00000511426 TIRAPP58753 221 aa10.61□□□□□ -0.71
SCLT1-209ENST00000511426 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
SCLT1-209ENST00000511426 B9D2Q9BPU9 175 aa10.61□□□□□ -0.71
SCLT1-209ENST00000511426 PRO1933Q9H354 126 aa10.61□□□□□ -0.71
SCLT1-209ENST00000511426 DDTP30046 118 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 OR5A1Q8NGJ0 315 aa10.6□□□□□ -0.71
SCLT1-209ENST00000511426 PKD1L1Q8TDX9 2849 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms