RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ATP6V0E2Q8NHE4 81 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 RS1O15537 224 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
USP38-202ENST00000510377 PEMTQ9UBM1 199 aa11.13□□□□□ -0.63
USP38-202ENST00000510377 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 COPS9Q8WXC6 57 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 Q9H8V8 135 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 AKAP13Q12802 2813 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 SLURP1P55000 103 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
USP38-202ENST00000510377 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
USP38-202ENST00000510377 ICOSQ9Y6W8 199 aa11.12□□□□□ -0.63
USP38-202ENST00000510377 A0A0J9YX75 114 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 HIST2H2BDQ6DRA6 164 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 ZNF580Q9UK33 172 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 A0A0J9YXY3 114 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 GAGE6Q13070 117 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 H3BUA1 57 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
USP38-202ENST00000510377 U3KQE9 123 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 IGHV3-33P01772 117 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 CRIP2P52943 208 aaPredicted RBP11.11□□□□□ -0.63
USP38-202ENST00000510377 GAGE2AQ6NT46 116 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 CHCHD5Q9BSY4 110 aa11.11□□□□□ -0.63
USP38-202ENST00000510377 IGHV4OR15-8A0A075B7B6 117 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 A0A087WW49 117 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 GAGE7O76087 117 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 GAGE12FP0CL80 117 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 GAGE12GP0CL81 117 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 GAGE12IP0CL82 117 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 M0QY20 66 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 PF4P02776 101 aa11.1□□□□□ -0.63
USP38-202ENST00000510377 IGIPA6NJ69 53 aa11.09□□□□□ -0.63
USP38-202ENST00000510377 INSP01308 110 aa11.09□□□□□ -0.63
USP38-202ENST00000510377 UBE2D1P51668 147 aa11.09□□□□□ -0.63
USP38-202ENST00000510377 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
USP38-202ENST00000510377 IGLV4-3A0A075B6K6 122 aa11.09□□□□□ -0.63
USP38-202ENST00000510377 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
USP38-202ENST00000510377 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
USP38-202ENST00000510377 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
USP38-202ENST00000510377 PAX4O43316 350 aa11.08□□□□□ -0.64
USP38-202ENST00000510377 A6NDX4 124 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 TRIAP1O43715 76 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 CRPP02741 224 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 ASPMQ8IZT6 3477 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 CRYGDP07320 174 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 DCHS1Q96JQ0 3298 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 TRBV27A0A0K0K1C4 114 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 PFN2P35080 140 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 DEFB113Q30KQ7 82 aa11.07□□□□□ -0.64
USP38-202ENST00000510377 BBC3Q96PG8 261 aaPredicted RBP11.07□□□□□ -0.64
USP38-202ENST00000510377 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
USP38-202ENST00000510377 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
USP38-202ENST00000510377 TSHBP01222 138 aa11.06□□□□□ -0.64
USP38-202ENST00000510377 Q6ZSV7 163 aa11.06□□□□□ -0.64
USP38-202ENST00000510377 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
USP38-202ENST00000510377 K7EMT4 169 aa11.05□□□□□ -0.64
USP38-202ENST00000510377 LGALS9O00182 355 aa11.05□□□□□ -0.64
USP38-202ENST00000510377 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
USP38-202ENST00000510377 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
USP38-202ENST00000510377 KLLNB2CW77 178 aa11.04□□□□□ -0.64
USP38-202ENST00000510377 LINC01619G3V211 115 aa11.04□□□□□ -0.64
USP38-202ENST00000510377 ANKRD17O75179 2603 aaKnown RBP11.04□□□□□ -0.64
USP38-202ENST00000510377 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
USP38-202ENST00000510377 CDKN2A-AS1Q9UH64 79 aa11.04□□□□□ -0.64
USP38-202ENST00000510377 PRO0461Q9UI25 63 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 A0A0B4J2C4 111 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 UBE2D3P61077 147 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 UBE2D2P62837 147 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 ATMQ13315 3056 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 LINC01546A6NGU7 62 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 K7EQG2 157 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
USP38-202ENST00000510377 TMEM61Q8N0U2 210 aa11.02□□□□□ -0.64
USP38-202ENST00000510377 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.64
USP38-202ENST00000510377 CFAP46Q8IYW2 2715 aa11.02□□□□□ -0.65
USP38-202ENST00000510377 HELZ2Q9BYK8 2649 aaKnown RBP11.02□□□□□ -0.65
USP38-202ENST00000510377 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
USP38-202ENST00000510377 CDIP1Q9H305 208 aa11.02□□□□□ -0.65
USP38-202ENST00000510377 MUC3AQ02505 3323 aa11.02□□□□□ -0.65
USP38-202ENST00000510377 DCANP1Q8TF63 244 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 COL27A1Q8IZC6 1860 aaPredicted RBP11.01□□□□□ -0.65
USP38-202ENST00000510377 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 DEFB130BP0DP73 79 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 DEFB130AP0DP74 79 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 NDUFV3P56181 108 aaKnown RBP11.01□□□□□ -0.65
USP38-202ENST00000510377 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 DMDP11532 3685 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 F8P00451 2351 aa11.01□□□□□ -0.65
USP38-202ENST00000510377 C9orf153Q5TBE3 101 aa11□□□□□ -0.65
USP38-202ENST00000510377 SOCS3O14543 225 aa11□□□□□ -0.65
USP38-202ENST00000510377 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
USP38-202ENST00000510377 LRBAP50851 2863 aa11□□□□□ -0.65
USP38-202ENST00000510377 ELANEP08246 267 aa11□□□□□ -0.65
USP38-202ENST00000510377 MIAQ16674 131 aa11□□□□□ -0.65
USP38-202ENST00000510377 HERVK_113P63121 156 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms