RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 FGF23Q9GZV9 251 aaPredicted RBP3.08□□□□□ -1.92
NIPBL-206ENST00000509429 CDC42SE1Q9NRR8 79 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 PSENENQ9NZ42 101 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 ADAMTS9Q9P2N4 1935 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 DOCK11Q5JSL3 2073 aa3.08□□□□□ -1.92
NIPBL-206ENST00000509429 SMIM27A0A1W2PRY6 76 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 TMEM14DPA8MWL7 114 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 SRRM5B3KS81 715 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 C5orf67F2Z3F1 127 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 IGHV1-69P01742 117 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 CMC4P56277 68 aaPredicted RBP3.07□□□□□ -1.92
NIPBL-206ENST00000509429 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 SUPT4H1P63272 117 aaKnown RBP3.07□□□□□ -1.92
NIPBL-206ENST00000509429 ZNF826PQ6ZT77 177 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 LYPD6Q86Y78 171 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 CNEP1R1Q8N9A8 125 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 NPBQ8NG41 125 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 ZNF414Q96IQ9 312 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 LIMD2Q9BT23 127 aa3.07□□□□□ -1.92
NIPBL-206ENST00000509429 TDRD6O60522 2096 aaKnown RBP3.07□□□□□ -1.92
NIPBL-206ENST00000509429 IGHV3-21A0A0B4J1V1 117 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 C17orf51A8MQB3 221 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 SH2D1AO60880 128 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 IGLV2-23P01705 113 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 CLPSP04118 112 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 EML5Q05BV3 1969 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 NNATQ16517 81 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 MIAQ16674 131 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 ATP5EP2Q5VTU8 51 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 Q5VV11 94 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 DNAH12Q6ZR08 3092 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 ZNF818PQ6ZRF7 136 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 DYNAPQ8N1N2 210 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 MED13Q9UHV7 2174 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 V9GYV3 84 aa3.06□□□□□ -1.92
NIPBL-206ENST00000509429 ABCA7Q8IZY2 2146 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 IGHV4-30-2A0A087WSY4 118 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 IGKV2D-26A0A0A0MRZ7 120 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 IGKV3D-11A0A0A0MRZ8 115 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 TRBV30A0A0K0K1B3 111 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 SDHAF1A6NFY7 115 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 C10orf142B7Z368 130 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 H7C423 109 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 IGKV3-11P04433 115 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 MOBPQ13875 183 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 DEFB110Q30KQ9 67 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 RNASE13Q5GAN3 156 aaKnown RBP3.05□□□□□ -1.92
NIPBL-206ENST00000509429 SFTA2Q6UW10 78 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 Q8NDZ9 215 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 KLF14Q8TD94 323 aaPredicted RBP3.05□□□□□ -1.92
NIPBL-206ENST00000509429 LINC00467Q9BRT7 94 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 C8orf17Q9NRJ1 99 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 MPDZO75970 2070 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 PCNX3Q9H6A9 2034 aa3.05□□□□□ -1.92
NIPBL-206ENST00000509429 TNRC6BQ9UPQ9 1833 aaKnown RBP3.05□□□□□ -1.92
NIPBL-206ENST00000509429 IGHV4OR15-8A0A075B7B6 117 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 IGHV7-4-1A0A0J9YVY3 117 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 RPL37AP8A6NKH3 93 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 H3BSH0 61 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 SOCS3O14543 225 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 COX6CP09669 75 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 RPS27P42677 84 aaKnown RBP3.04□□□□□ -1.92
NIPBL-206ENST00000509429 EDDM3BP56851 147 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 ROMO1P60602 79 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 C1orf134Q5TEV5 83 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 C20orf203Q8NBC4 194 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 C7orf33Q8WU49 177 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 TMEM14BQ9NUH8 114 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 TIMM9Q9Y5J7 89 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 ARID1AO14497 2285 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 HTTP42858 3142 aa3.04□□□□□ -1.92
NIPBL-206ENST00000509429 IGLV4-3A0A075B6K6 122 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 SPTY2D1-AS1A0A0U1RR47 76 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 CTXND1A0A1B0GTU2 59 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 CHKB-CPT1BH3BT56 60 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 K7ERS5 55 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 IGLV3-19P01714 112 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 CFC1P0CG37 223 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 FCER1GP30273 86 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 ARHGAP5-AS1Q96IT6 56 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 C1orf147Q96MC9 270 aaPredicted RBP3.03□□□□□ -1.92
NIPBL-206ENST00000509429 NACAE9PAV3 2078 aa3.03□□□□□ -1.92
NIPBL-206ENST00000509429 MYO7AQ13402 2215 aa3.03□□□□□ -1.93
NIPBL-206ENST00000509429 A0A087WW49 117 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 IGHV3-49A0A0A0MS15 119 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 TRBV6-8A0A0A6YYG3 113 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 A0A0J9YXY3 114 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 LY6HO94772 140 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 IGLV3-1P01715 115 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 IGHV3-33P01772 117 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 C10orf128Q5T292 105 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 C2orf66Q6UXQ4 117 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 PATE1Q8WXA2 126 aa3.02□□□□□ -1.93
NIPBL-206ENST00000509429 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms