RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PRR34Q9NV39 138 aa10.64□□□□□ -0.71
PDLIM5-212ENST00000509333 IGLV5-52A0A0A0MRZ9 124 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 A0A1B0GUV1 79 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 LECT2O14960 151 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 GAS8-AS1O95177 125 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 BORCS7Q96B45 105 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 ABCA13Q86UQ4 5058 aa10.63□□□□□ -0.71
PDLIM5-212ENST00000509333 FAT1Q14517 4588 aa10.62□□□□□ -0.71
PDLIM5-212ENST00000509333 RAB4AP20338 218 aa10.62□□□□□ -0.71
PDLIM5-212ENST00000509333 ADIRFQ15847 76 aa10.62□□□□□ -0.71
PDLIM5-212ENST00000509333 LINC00269Q8N2A0 174 aa10.62□□□□□ -0.71
PDLIM5-212ENST00000509333 TMEM243Q9BU79 118 aa10.62□□□□□ -0.71
PDLIM5-212ENST00000509333 SMIM27A0A1W2PRY6 76 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 RIGQ13278 110 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 COTL1Q14019 142 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 MIAQ16674 131 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 Q8N1X5 172 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 C20orf203Q8NBC4 194 aa10.61□□□□□ -0.71
PDLIM5-212ENST00000509333 PCLOQ9Y6V0 5065 aa10.6□□□□□ -0.71
PDLIM5-212ENST00000509333 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
PDLIM5-212ENST00000509333 C1orf43Q9BWL3 253 aa10.6□□□□□ -0.71
PDLIM5-212ENST00000509333 NAT8BQ9UHF3 227 aa10.6□□□□□ -0.71
PDLIM5-212ENST00000509333 IGLV4-60A0A075B6I1 120 aa10.59□□□□□ -0.71
PDLIM5-212ENST00000509333 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
PDLIM5-212ENST00000509333 NCR2O95944 276 aa10.58□□□□□ -0.72
PDLIM5-212ENST00000509333 CRPP02741 224 aa10.58□□□□□ -0.72
PDLIM5-212ENST00000509333 AMTP48728 403 aa10.58□□□□□ -0.72
PDLIM5-212ENST00000509333 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-212ENST00000509333 RAB14P61106 215 aa10.58□□□□□ -0.72
PDLIM5-212ENST00000509333 AMN1Q8IY45 258 aa10.58□□□□□ -0.72
PDLIM5-212ENST00000509333 I3L3M4 83 aa10.57□□□□□ -0.72
PDLIM5-212ENST00000509333 RPS10P46783 165 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-212ENST00000509333 REG3AQ06141 175 aa10.57□□□□□ -0.72
PDLIM5-212ENST00000509333 FAM30AQ9NZY2 134 aa10.57□□□□□ -0.72
PDLIM5-212ENST00000509333 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-212ENST00000509333 PMCHP20382 165 aa10.56□□□□□ -0.72
PDLIM5-212ENST00000509333 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
PDLIM5-212ENST00000509333 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
PDLIM5-212ENST00000509333 UBE2L6O14933 153 aa10.55□□□□□ -0.72
PDLIM5-212ENST00000509333 IFITM2Q01629 132 aa10.55□□□□□ -0.72
PDLIM5-212ENST00000509333 CLLU1Q5K131 121 aa10.55□□□□□ -0.72
PDLIM5-212ENST00000509333 FAM104BQ5XKR9 115 aa10.55□□□□□ -0.72
PDLIM5-212ENST00000509333 CLPSL2Q6UWE3 100 aa10.55□□□□□ -0.72
PDLIM5-212ENST00000509333 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
PDLIM5-212ENST00000509333 TRAV8-4A0A0B4J246 113 aa10.54□□□□□ -0.72
PDLIM5-212ENST00000509333 H7C423 109 aa10.54□□□□□ -0.72
PDLIM5-212ENST00000509333 ESDP10768 282 aa10.54□□□□□ -0.72
PDLIM5-212ENST00000509333 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
PDLIM5-212ENST00000509333 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
PDLIM5-212ENST00000509333 TSHBP01222 138 aa10.53□□□□□ -0.72
PDLIM5-212ENST00000509333 CAMPP49913 170 aa10.53□□□□□ -0.72
PDLIM5-212ENST00000509333 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-212ENST00000509333 NRACQ8N912 160 aa10.53□□□□□ -0.72
PDLIM5-212ENST00000509333 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 A0A1B0GW15 77 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 USP17L23D6RBM5 183 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 VCYO14598 125 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 APCSP02743 223 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 LINC01620Q4KN68 170 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 C14orf177Q52M58 125 aa10.52□□□□□ -0.73
PDLIM5-212ENST00000509333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-212ENST00000509333 IGKV2-29A2NJV5 120 aaPredicted RBP10.51□□□□□ -0.73
PDLIM5-212ENST00000509333 PPP1R17O96001 155 aa10.51□□□□□ -0.73
PDLIM5-212ENST00000509333 PRSS1P07477 247 aa10.51□□□□□ -0.73
PDLIM5-212ENST00000509333 FGF6P10767 208 aa10.51□□□□□ -0.73
PDLIM5-212ENST00000509333 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
PDLIM5-212ENST00000509333 LINC00862A6NCI5 91 aa10.5□□□□□ -0.73
PDLIM5-212ENST00000509333 HLA-DQA1P01909 254 aa10.5□□□□□ -0.73
PDLIM5-212ENST00000509333 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
PDLIM5-212ENST00000509333 Q6ZSA8 131 aa10.5□□□□□ -0.73
PDLIM5-212ENST00000509333 TMEM242Q9NWH2 141 aa10.5□□□□□ -0.73
PDLIM5-212ENST00000509333 TRBV24-1A0A075B6N3 115 aa10.49□□□□□ -0.73
PDLIM5-212ENST00000509333 PPP1R2P9O14990 202 aa10.49□□□□□ -0.73
PDLIM5-212ENST00000509333 SUMO2P61956 95 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-212ENST00000509333 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
PDLIM5-212ENST00000509333 MRPL54Q6P161 138 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-212ENST00000509333 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
PDLIM5-212ENST00000509333 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
PDLIM5-212ENST00000509333 HAMPP81172 84 aa10.48□□□□□ -0.73
PDLIM5-212ENST00000509333 PNRC1Q12796 327 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-212ENST00000509333 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
PDLIM5-212ENST00000509333 CLRN3Q8NCR9 226 aa10.48□□□□□ -0.73
PDLIM5-212ENST00000509333 S100A8P05109 93 aa10.47□□□□□ -0.73
PDLIM5-212ENST00000509333 CKS2P33552 79 aa10.47□□□□□ -0.73
PDLIM5-212ENST00000509333 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
PDLIM5-212ENST00000509333 MT-ND4LP03901 98 aa10.46□□□□□ -0.73
PDLIM5-212ENST00000509333 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-212ENST00000509333 HBBP68871 147 aa10.46□□□□□ -0.73
PDLIM5-212ENST00000509333 ANAPC16Q96DE5 110 aa10.46□□□□□ -0.73
PDLIM5-212ENST00000509333 VPS13BQ7Z7G8 4022 aa10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 IGKV3OR2-268A0A0C4DH90 116 aa10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 GAGE12HA6NDE8 117 aa10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 F8W036 122 aa10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 TNFRSF6BO95407 300 aa10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 MRPL52Q86TS9 123 aaKnown RBP10.45□□□□□ -0.74
PDLIM5-212ENST00000509333 C9orf163Q8N9P6 203 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms