RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
NEDD9-211ENST00000508546 ENHOQ6UWT2 76 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 SDIM1Q6ZPB5 146 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 BTF3L4Q96K17 158 aa6□□□□□ -1.45
NEDD9-211ENST00000508546 RPP21Q9H633 154 aaKnown RBP6□□□□□ -1.45
NEDD9-211ENST00000508546 TRAV9-1A0A075B6T8 112 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 RHODO00212 210 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 RPL19P84098 196 aaKnown RBP5.99□□□□□ -1.45
NEDD9-211ENST00000508546 SMUG1Q53HV7 270 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 CT83Q5H943 113 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 COX8CQ7Z4L0 72 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 NUDT10Q8NFP7 164 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 NUDT11Q96G61 164 aa5.99□□□□□ -1.45
NEDD9-211ENST00000508546 SMIM27A0A1W2PRY6 76 aa5.98□□□□□ -1.45
NEDD9-211ENST00000508546 CRPP02741 224 aa5.98□□□□□ -1.45
NEDD9-211ENST00000508546 S100A4P26447 101 aaKnown RBP5.98□□□□□ -1.45
NEDD9-211ENST00000508546 RPS10P46783 165 aaKnown RBP5.98□□□□□ -1.45
NEDD9-211ENST00000508546 FAM162BQ5T6X4 162 aa5.98□□□□□ -1.45
NEDD9-211ENST00000508546 RNF185Q96GF1 192 aa5.98□□□□□ -1.45
NEDD9-211ENST00000508546 LINC01600Q96MT4 127 aa5.98□□□□□ -1.45
NEDD9-211ENST00000508546 JPT2Q9H910 190 aa5.98□□□□□ -1.45
NEDD9-211ENST00000508546 IGKV3D-20A0A0C4DH25 116 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 TRBV10-1A0A0K0K1A3 114 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 A8MWL6 223 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 SH2D1AO60880 128 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 HLA-DQA1P01909 254 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 MIAQ16674 131 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-211ENST00000508546 OR2D3Q8NGH3 330 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 TSKUQ8WUA8 353 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 DPH3P1Q9H4G8 78 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 NAT8BQ9UHF3 227 aa5.97□□□□□ -1.45
NEDD9-211ENST00000508546 TRBV7-3A0A075B6L6 115 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 HIGD1CA8MV81 97 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 C1orf196B1AJZ1 125 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 TMEM262E9PQX1 116 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 CRIP1P50238 77 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 RAB5BP61020 215 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 UBE2D3P61077 147 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 UBE2D2P62837 147 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.46
NEDD9-211ENST00000508546 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
NEDD9-211ENST00000508546 GFRA4Q9GZZ7 299 aa5.96□□□□□ -1.46
NEDD9-211ENST00000508546 TRBV6-8A0A0A6YYG3 113 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 XKRY2A2RUG3 117 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 FAM231BA6NCW3 169 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 FABP5P3A8MUU1 101 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 ANGP03950 147 aaKnown RBP5.95□□□□□ -1.46
NEDD9-211ENST00000508546 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
NEDD9-211ENST00000508546 MPV17L2Q567V2 206 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 DNLZQ5SXM8 178 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 FAM74A4Q5TZK3 123 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 KRTAP26-1Q6PEX3 210 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 PRR34Q9NV39 138 aa5.95□□□□□ -1.46
NEDD9-211ENST00000508546 FSIP2Q5CZC0 6907 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 A0A087WYN8 130 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 TMSB15BA0A087X1C1 80 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 H3BVH4 76 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 TRGC2P03986 189 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 RPS20P60866 119 aaKnown RBP5.94□□□□□ -1.46
NEDD9-211ENST00000508546 PKIAP61925 76 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 LINC01559Q495D7 138 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 MRPL54Q6P161 138 aaKnown RBP5.94□□□□□ -1.46
NEDD9-211ENST00000508546 ATP5L2Q7Z4Y8 100 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 NUP35Q8NFH5 326 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 GTSF1Q8WW33 167 aa5.94□□□□□ -1.46
NEDD9-211ENST00000508546 A0A087WWL8 130 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 A0A0J9YXV3 536 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 MT-ND6P03923 174 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 ARMS2P0C7Q2 107 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 GZMBP10144 247 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 COX19Q49B96 90 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 WDR73Q6P4I2 378 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 RASL11AQ6T310 242 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 ZFP82Q8N141 532 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 PGLYRP4Q96LB8 373 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
NEDD9-211ENST00000508546 IGHV3-64A0A075B6Q5 118 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 PHOX2AO14813 284 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 CTRLP40313 264 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 HBBP68871 147 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 C7orf33Q8WU49 177 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 BORCS7Q96B45 105 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 TPPP3Q9BW30 176 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 TRAPPC1Q9Y5R8 145 aa5.92□□□□□ -1.46
NEDD9-211ENST00000508546 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-211ENST00000508546 A0A1B0GUT8 65 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 A0A1B0GXF2 115 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 IGLC6P0CF74 106 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 FOXA3P55318 350 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-211ENST00000508546 RAB4BP61018 213 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 FABP9Q0Z7S8 132 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 TMEM136Q6ZRR5 245 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 FER1L6-AS1Q8NA97 138 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 CHCHD5Q9BSY4 110 aa5.91□□□□□ -1.46
NEDD9-211ENST00000508546 GNB1LQ9BYB4 327 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms