RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PRO0628Q9UI54 55 aa5.49□□□□□ -1.53
UBE2D3-224ENST00000508474 ARFGEF3Q5TH69 2177 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 CCKP06307 115 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 MIFP14174 115 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 SMAD5-AS1Q9Y6J3 95 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 SLPIP03973 132 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 PPDPFQ9H3Y8 114 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 NCOA6Q14686 2063 aaPredicted RBP5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 IGIPA6NJ69 53 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 TSHBP01222 138 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 APRG1Q8IVJ8 170 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 ZFAND3Q9H8U3 227 aa5.48□□□□□ -1.53
UBE2D3-224ENST00000508474 DOCK7Q96N67 2140 aa5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 ODF3BA8MYP8 253 aa5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 FSTL3O95633 263 aa5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 UNQ9165/PRO28630Q6UXU0 137 aa5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 A0A096LNJ9 63 aa5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 CRIP2P52943 208 aaPredicted RBP5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 MALRD1Q5VYJ5 2156 aa5.47□□□□□ -1.53
UBE2D3-224ENST00000508474 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.53
UBE2D3-224ENST00000508474 DEFB1P60022 68 aa5.46□□□□□ -1.53
UBE2D3-224ENST00000508474 MSMPQ1L6U9 139 aa5.46□□□□□ -1.53
UBE2D3-224ENST00000508474 COX8CQ7Z4L0 72 aa5.46□□□□□ -1.53
UBE2D3-224ENST00000508474 APC2O95996 2303 aa5.46□□□□□ -1.53
UBE2D3-224ENST00000508474 IGKV2D-24A0A075B6R9 120 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 CLPSL1A2RUU4 121 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 DOCK10Q96BY6 2186 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 POLEQ07864 2286 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 UBE2AP49459 152 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 ABCA1O95477 2261 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 CACNA1EQ15878 2313 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 LY6DQ14210 128 aa5.46□□□□□ -1.54
UBE2D3-224ENST00000508474 CRYGAP11844 174 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 SIRPDQ9H106 197 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 SLURP1P55000 103 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 SMIM11BQ8TCY0 68 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 IGLV4-69A0A075B6H9 119 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 LOC107984640A0A0U1RRK4 108 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 RNASE3P12724 160 aaKnown RBP5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 RPL28P46779 137 aaKnown RBP5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 EBI3Q14213 229 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 DEFB112Q30KQ8 113 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 SCXQ7RTU7 201 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 ROS1P08922 2347 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 IGHV4-59P01825 116 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 MUC7Q8TAX7 377 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 PSMG3-AS1Q96PY0 264 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 C11orf21Q9P2W6 132 aa5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 SPTBN1Q01082 2364 aaKnown RBP5.45□□□□□ -1.54
UBE2D3-224ENST00000508474 PCNX3Q9H6A9 2034 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 DAZAP2Q15038 168 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 NUP210LQ5VU65 1888 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 A6NED7 52 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 K7ENP7 123 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 CCL24O00175 119 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 K7EQG2 157 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 GTF3C1Q12789 2109 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 C6orf99Q4VX62 202 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 PRORYQ9H606 182 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 PKDREJQ9NTG1 2253 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 NOTCH4Q99466 2003 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 ATG2AQ2TAZ0 1938 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 LY6LH3BQJ8 138 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 IGF1P05019 195 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 MED13Q9UHV7 2174 aa5.44□□□□□ -1.54
UBE2D3-224ENST00000508474 SEC61GP60059 68 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 C9orf85Q96MD7 179 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 PRO0255Q9UI72 69 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 LINC01546A6NGU7 62 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 RNF223E7ERA6 249 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 POM121L12Q8N7R1 296 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 PRO0461Q9UI25 63 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 KLK5Q9Y337 293 aaPredicted RBP5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 KLLNB2CW77 178 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 SPART-AS1P0CW21 52 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 SEM1Q6ZVN7 128 aa5.43□□□□□ -1.54
UBE2D3-224ENST00000508474 IGLV2-18A0A075B6J9 118 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 PLA2G2CQ5R387 149 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 A6NDX4 124 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 A8MZ25 164 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 COX17Q14061 63 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 DEFB136Q30KP8 78 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 MAP6D1Q9H9H5 199 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 DSCAML1Q8TD84 2053 aa5.42□□□□□ -1.54
UBE2D3-224ENST00000508474 A0A087WVE0 104 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 BCE1O60756 84 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 IGHV4-38-2P0DP08 117 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 ZGRF1Q86YA3 2104 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 CRYGDP07320 174 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 C4orf3Q8WVX3 66 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 PRYO14603 147 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 IGF2-ASQ6U949 168 aa5.41□□□□□ -1.54
UBE2D3-224ENST00000508474 NTM-AS1Q6ZSK4 140 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms