RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TRAV8-6A0A0B4J262 113 aa12.68□□□□□ -0.38
SFXN1-208ENST00000507823 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
SFXN1-208ENST00000507823 A6NDN8 102 aa12.68□□□□□ -0.38
SFXN1-208ENST00000507823 INSL3P51460 131 aa12.68□□□□□ -0.38
SFXN1-208ENST00000507823 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
SFXN1-208ENST00000507823 FN1P02751 2386 aaKnown RBP12.68□□□□□ -0.38
SFXN1-208ENST00000507823 MYMXA0A1B0GTQ4 84 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 ZNRF2Q8NHG8 242 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 AMELXQ99217 191 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 OVOL2Q9BRP0 275 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 TM2D2Q9BX73 214 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 OR4C5Q8NGB2 326 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 C2CD3Q4AC94 2353 aa12.67□□□□□ -0.38
SFXN1-208ENST00000507823 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
SFXN1-208ENST00000507823 H3BRM9 83 aa12.66□□□□□ -0.38
SFXN1-208ENST00000507823 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
SFXN1-208ENST00000507823 Q6ZTI0 123 aa12.66□□□□□ -0.38
SFXN1-208ENST00000507823 OPRPNQ99935 248 aaPredicted RBP12.65□□□□□ -0.38
SFXN1-208ENST00000507823 NIPBLQ6KC79 2804 aaeCLIP12.65□□□□□ -0.38
SFXN1-208ENST00000507823 CIDEAO60543 219 aa12.65□□□□□ -0.38
SFXN1-208ENST00000507823 HERVK_113P61574 105 aa12.65□□□□□ -0.38
SFXN1-208ENST00000507823 SPANXA1Q9NS26 97 aa12.65□□□□□ -0.38
SFXN1-208ENST00000507823 JMJD1CQ15652 2540 aa12.65□□□□□ -0.39
SFXN1-208ENST00000507823 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
SFXN1-208ENST00000507823 UBE2V1Q13404 147 aa12.64□□□□□ -0.39
SFXN1-208ENST00000507823 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
SFXN1-208ENST00000507823 CEND1Q8N111 149 aa12.63□□□□□ -0.39
SFXN1-208ENST00000507823 CITED1Q99966 193 aa12.63□□□□□ -0.39
SFXN1-208ENST00000507823 VCX2Q9H322 139 aa12.63□□□□□ -0.39
SFXN1-208ENST00000507823 UBE2D4Q9Y2X8 147 aa12.63□□□□□ -0.39
SFXN1-208ENST00000507823 COTL1Q14019 142 aa12.62□□□□□ -0.39
SFXN1-208ENST00000507823 C9orf66Q5T8R8 295 aa12.62□□□□□ -0.39
SFXN1-208ENST00000507823 NOP10Q9NPE3 64 aaKnown RBP12.62□□□□□ -0.39
SFXN1-208ENST00000507823 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
SFXN1-208ENST00000507823 K7EQD1 137 aa12.62□□□□□ -0.39
SFXN1-208ENST00000507823 FXYD2P54710 66 aa12.62□□□□□ -0.39
SFXN1-208ENST00000507823 EMP1P54849 157 aa12.62□□□□□ -0.39
SFXN1-208ENST00000507823 TIMM21Q9BVV7 248 aa12.61□□□□□ -0.39
SFXN1-208ENST00000507823 RRN3P1Q2M238 152 aa12.61□□□□□ -0.39
SFXN1-208ENST00000507823 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
SFXN1-208ENST00000507823 C9orf118A6NHY6 69 aa12.6□□□□□ -0.39
SFXN1-208ENST00000507823 MRPS36P82909 103 aaKnown RBP12.6□□□□□ -0.39
SFXN1-208ENST00000507823 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
SFXN1-208ENST00000507823 GCSHP23434 173 aa12.6□□□□□ -0.39
SFXN1-208ENST00000507823 CCL25O15444 150 aa12.59□□□□□ -0.39
SFXN1-208ENST00000507823 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
SFXN1-208ENST00000507823 TMEM170BQ5T4T1 132 aa12.59□□□□□ -0.39
SFXN1-208ENST00000507823 UBE2D3P61077 147 aa12.58□□□□□ -0.39
SFXN1-208ENST00000507823 UBE2D2P62837 147 aa12.58□□□□□ -0.39
SFXN1-208ENST00000507823 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.39
SFXN1-208ENST00000507823 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.39
SFXN1-208ENST00000507823 SPATA3Q8NHX4 192 aa12.58□□□□□ -0.39
SFXN1-208ENST00000507823 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.39
SFXN1-208ENST00000507823 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.39
SFXN1-208ENST00000507823 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.58□□□□□ -0.4
SFXN1-208ENST00000507823 SLC25A29Q8N8R3 303 aa12.58□□□□□ -0.4
SFXN1-208ENST00000507823 PHLDA1Q8WV24 401 aaPredicted RBP12.58□□□□□ -0.4
SFXN1-208ENST00000507823 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
SFXN1-208ENST00000507823 IGHV3-38A0A0C4DH36 116 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 VAMP3Q15836 100 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 TRBV6-4A0A1B0GX49 114 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 K7EP13 123 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 LEPROTO15243 131 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 PTTG1IPP53801 180 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 LINC00612Q8N6U2 182 aa12.57□□□□□ -0.4
SFXN1-208ENST00000507823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.56□□□□□ -0.4
SFXN1-208ENST00000507823 IGKV2-29A2NJV5 120 aaPredicted RBP12.56□□□□□ -0.4
SFXN1-208ENST00000507823 SMIM13P0DJ93 91 aa12.56□□□□□ -0.4
SFXN1-208ENST00000507823 CEMP1Q6PRD7 247 aaPredicted RBP12.56□□□□□ -0.4
SFXN1-208ENST00000507823 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
SFXN1-208ENST00000507823 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
SFXN1-208ENST00000507823 TINCRA0A1B0GVN0 87 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 J3QQQ9 107 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 PLEKHB2Q96CS7 222 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 HIST1H4GQ99525 98 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 CSDC2Q9Y534 153 aaKnown RBP12.55□□□□□ -0.4
SFXN1-208ENST00000507823 GAGE12BA1L429 117 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 GAGE7O76087 117 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 GAGE12FP0CL80 117 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 GAGE12GP0CL81 117 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 GAGE12IP0CL82 117 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
SFXN1-208ENST00000507823 A0A0J9YY99 117 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 AMMECR1LQ6DCA0 310 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 Q6ZUT4 128 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 GTSF1LQ9H1H1 148 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 SPANXB1Q9NS25 103 aaPredicted RBP12.54□□□□□ -0.4
SFXN1-208ENST00000507823 WIPF1O43516 503 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 WFDC9Q8NEX5 89 aa12.54□□□□□ -0.4
SFXN1-208ENST00000507823 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
SFXN1-208ENST00000507823 TRGV2A0A075B6R0 118 aa12.53□□□□□ -0.4
SFXN1-208ENST00000507823 SMIM9A6NGZ8 99 aa12.53□□□□□ -0.4
SFXN1-208ENST00000507823 FAM19A3Q7Z5A8 133 aa12.52□□□□□ -0.4
SFXN1-208ENST00000507823 X6R8D5 127 aa12.52□□□□□ -0.4
SFXN1-208ENST00000507823 LINC00694P0DN24 101 aa12.52□□□□□ -0.41
SFXN1-208ENST00000507823 UBE2D1P51668 147 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms