RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 BAGE3Q86Y29 109 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 BPESC1Q9GZL8 116 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 TMEM14BQ9NUH8 114 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 PHIPQ8WWQ0 1821 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 PLIN4Q96Q06 1357 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 ADGRB2O60241 1585 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 RREB1Q92766 1687 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 TNRC6AQ8NDV7 1962 aaKnown RBP1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 PCDH15Q96QU1 1955 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 ARHGEF12Q9NZN5 1544 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 MARF1Q9Y4F3 1742 aaKnown RBP1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 IGLC7A0M8Q6 106 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 M0R135 149 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 ACYP2P14621 99 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 CCL18P55774 89 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 TDRG1Q3Y452 100 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 MRC1P22897 1456 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 STRCP1A6NGW2 1772 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 PTPRDP23468 1912 aa1.66□□□□□ -2.14
HMGB1P22-201ENST00000505315 ARFGEF3Q5TH69 2177 aa1.65□□□□□ -2.14
HMGB1P22-201ENST00000505315 TRAV1-2A0A0B4J238 106 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 PCOTHQ58A44 107 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 VMO1Q7Z5L0 202 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 BAGE2Q86Y30 109 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 FAM223AQ8IWN6 122 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 CYSTM1Q9H1C7 97 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 CDC42SE2Q9NRR3 84 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 CR1P17927 2039 aa1.65□□□□□ -2.15
HMGB1P22-201ENST00000505315 KDM5AP29375 1690 aaKnown RBP1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 TRGV1A0A0A0MS02 117 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 FAM223BA6NKX1 122 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 F2Z2F3 143 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 H7BZZ5 65 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 M0R3E3 92 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 ETDBQ3ZM63 59 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 ST20Q9HBF5 79 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 HIGD1BQ9P298 99 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 LRRC37A3O60309 1634 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 TOP2BQ02880 1626 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 DOCK1Q14185 1865 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 SNRNP200O75643 2136 aaKnown RBP1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 CHD3Q12873 2000 aaKnown RBP1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 ZNF142P52746 1687 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 MED13Q9UHV7 2174 aa1.64□□□□□ -2.15
HMGB1P22-201ENST00000505315 NRXN2Q9P2S2 1712 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 DLEC1Q9Y238 1755 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 TRBV25-1A0A075B6N4 114 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 A0A087WTM6 91 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 A0A1B0GWA3 101 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 KANTRA0A1W2PQU2 76 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 UQCR11O14957 56 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 SAA2P0DJI9 122 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 WFDC6Q9BQY6 131 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 PRR15LQ9BU68 103 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 RRBP1Q9P2E9 1410 aaKnown RBP1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 CACNA1GO43497 2377 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 GBF1Q92538 1859 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 ATP10BO94823 1461 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 PXDNQ92626 1479 aa1.63□□□□□ -2.15
HMGB1P22-201ENST00000505315 KDM5DQ9BY66 1539 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 PATJQ8NI35 1801 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 KRTAP1-1Q07627 177 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 ZGRF1Q86YA3 2104 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 SMIM4Q8WVI0 70 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 MAGI2Q86UL8 1455 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 PHRF1Q9P1Y6 1649 aaKnown RBP1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 MYH8P13535 1937 aa1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 MYO18AQ92614 2054 aaKnown RBP1.62□□□□□ -2.15
HMGB1P22-201ENST00000505315 MON2Q7Z3U7 1717 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 CEP162Q5TB80 1403 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 KIAA0100Q14667 2235 aaKnown RBP1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 C7orf77A4D0Y5 90 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 F8WEM9 126 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 MGPP08493 103 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 SNRPFP62306 86 aaKnown RBP1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 CFAP126Q5VTH2 177 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 LINC00575Q6W349 94 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 AMELXQ99217 191 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 SHROOM2Q13796 1616 aa1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 INTS1Q8N201 2190 aaKnown RBP1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 EPRSP07814 1512 aaKnown RBP1.61□□□□□ -2.15
HMGB1P22-201ENST00000505315 UNC13BO14795 1591 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 TET1Q8NFU7 2136 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 COX17Q14061 63 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 WFDC2Q14508 124 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 NMSQ5H8A3 153 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 ZCCHC13Q8WW36 166 aaKnown RBP1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 Q96NJ1 140 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 LINC01558Q9Y6Z2 57 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 ERVK-7P63135 1459 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 TET3O43151 1660 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 PCNX2A6NKB5 2137 aa1.6□□□□□ -2.15
HMGB1P22-201ENST00000505315 IQSEC2Q5JU85 1478 aa1.59□□□□□ -2.15
HMGB1P22-201ENST00000505315 BCE1O60756 84 aa1.59□□□□□ -2.15
HMGB1P22-201ENST00000505315 LEPROTL1O95214 131 aa1.59□□□□□ -2.15
HMGB1P22-201ENST00000505315 ZNF137PP52743 207 aa1.59□□□□□ -2.15
HMGB1P22-201ENST00000505315 KRTAP10-10P60014 251 aa1.59□□□□□ -2.15
HMGB1P22-201ENST00000505315 KRTAP10-7P60409 375 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P22-201ENST00000505315 DEFA5Q01523 94 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms