RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 UBE2WQ96B02 151 aa10.46□□□□□ -0.73
TCOF1-207ENST00000504761 FGF6P10767 208 aa10.46□□□□□ -0.74
TCOF1-207ENST00000504761 BAALCQ8WXS3 180 aa10.46□□□□□ -0.74
TCOF1-207ENST00000504761 IGSF10Q6WRI0 2623 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 CRIP2P52943 208 aaPredicted RBP10.45□□□□□ -0.74
TCOF1-207ENST00000504761 TEP1Q99973 2627 aaKnown RBP10.45□□□□□ -0.74
TCOF1-207ENST00000504761 AMTNQ6UX39 209 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 ADGRG4Q8IZF6 3080 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 Q9HAA7 133 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 TP73-AS1Q9UF72 201 aa10.45□□□□□ -0.74
TCOF1-207ENST00000504761 HERVK_113P63121 156 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 ODF1Q14990 250 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 ZMAT4Q9H898 229 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 MAST4O15021 2626 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 DNAJC30Q96LL9 226 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 DMXL1Q9Y485 3027 aa10.44□□□□□ -0.74
TCOF1-207ENST00000504761 C11orf86A6NJI1 115 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 C20orf203Q8NBC4 194 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 TOMM6Q96B49 74 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 KLLNB2CW77 178 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 LEPROTO15243 131 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 DAZ2Q13117 558 aaKnown RBP10.43□□□□□ -0.74
TCOF1-207ENST00000504761 DAZ4Q86SG3 579 aaKnown RBP10.43□□□□□ -0.74
TCOF1-207ENST00000504761 DAZ3Q9NR90 486 aaKnown RBP10.43□□□□□ -0.74
TCOF1-207ENST00000504761 Q9H8V8 135 aa10.43□□□□□ -0.74
TCOF1-207ENST00000504761 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 IGHV3-30-3P0DP02 117 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 FAM110AQ9BQ89 295 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 CST9LQ9H4G1 147 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 MRPL23Q16540 153 aaKnown RBP10.42□□□□□ -0.74
TCOF1-207ENST00000504761 ODF3L2Q3SX64 289 aa10.42□□□□□ -0.74
TCOF1-207ENST00000504761 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
TCOF1-207ENST00000504761 UBE2V1Q13404 147 aa10.41□□□□□ -0.74
TCOF1-207ENST00000504761 OXLD1Q5BKU9 147 aa10.41□□□□□ -0.74
TCOF1-207ENST00000504761 FLNCQ14315 2725 aa10.4□□□□□ -0.74
TCOF1-207ENST00000504761 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 CEND1Q8N111 149 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 TRAV8-3A0A0A6YYJ7 113 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 PRB2P02812 416 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-207ENST00000504761 SCRT2Q9NQ03 307 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 PRO0255Q9UI72 69 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 ZZEF1O43149 2961 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 M0QY20 66 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 DAND5Q8N907 189 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 TRAV4A0A0B4J268 109 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 CFAP126Q5VTH2 177 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 Q6ZUT4 128 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 ICOSQ9Y6W8 199 aa10.39□□□□□ -0.75
TCOF1-207ENST00000504761 CHD6Q8TD26 2715 aa10.38□□□□□ -0.75
TCOF1-207ENST00000504761 COL12A1Q99715 3063 aa10.38□□□□□ -0.75
TCOF1-207ENST00000504761 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
TCOF1-207ENST00000504761 MRPL52Q86TS9 123 aaKnown RBP10.38□□□□□ -0.75
TCOF1-207ENST00000504761 COL27A1Q8IZC6 1860 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-207ENST00000504761 SLC25A20O43772 301 aa10.37□□□□□ -0.75
TCOF1-207ENST00000504761 NPSP0C0P6 89 aa10.37□□□□□ -0.75
TCOF1-207ENST00000504761 SLC25A29Q8N8R3 303 aa10.37□□□□□ -0.75
TCOF1-207ENST00000504761 C9JAW5 83 aa10.37□□□□□ -0.75
TCOF1-207ENST00000504761 LINC00310P59036 64 aa10.36□□□□□ -0.75
TCOF1-207ENST00000504761 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
TCOF1-207ENST00000504761 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
TCOF1-207ENST00000504761 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
TCOF1-207ENST00000504761 NEXN-AS1Q8NBZ9 246 aa10.36□□□□□ -0.75
TCOF1-207ENST00000504761 LINC00467Q9BRT7 94 aa10.36□□□□□ -0.75
TCOF1-207ENST00000504761 TRAV12-1A0A0B4J245 112 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 NRACQ8N912 160 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 CRYGDP07320 174 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 FXYD2P54710 66 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 PRO1854Q9UHT4 67 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 LOC400499M0QZD8 3231 aa10.35□□□□□ -0.75
TCOF1-207ENST00000504761 SOCS3O14543 225 aa10.34□□□□□ -0.75
TCOF1-207ENST00000504761 SIVA1O15304 175 aa10.34□□□□□ -0.75
TCOF1-207ENST00000504761 ATXN8Q156A1 80 aa10.34□□□□□ -0.75
TCOF1-207ENST00000504761 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 SPATA12Q7Z6I5 190 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 U3KQK5 164 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 H3BMG7 143 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 Q8N976 141 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 LOC100131303A0A0U1RQF7 123 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 BRI3O95415 125 aa10.33□□□□□ -0.76
TCOF1-207ENST00000504761 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 C1orf43Q9BWL3 253 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 E9PLD3 99 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 NDUFA7O95182 113 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 ETDBQ3ZM63 59 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 C9orf85Q96MD7 179 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 EDA2RQ9HAV5 297 aa10.32□□□□□ -0.76
TCOF1-207ENST00000504761 CFAP47Q6ZTR5 3102 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
TCOF1-207ENST00000504761 MUC4Q99102 2169 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms