RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
POLR2J3-210ENST00000504677 GAGE12JA6NER3 117 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 LINC00694P0DN24 101 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 S100A12P80511 92 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 GAGE1Q13065 139 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 GAGE4Q13068 117 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 GAGE5Q13069 117 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 GAGE13Q4V321 117 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 ZMAT4Q9H898 229 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 DNHD1Q96M86 4753 aa8.42□□□□□ -1.06
POLR2J3-210ENST00000504677 PAX4O43316 350 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 NPSP0C0P6 89 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 LINC01545Q5VT33 79 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 Q6ZN92 141 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 PHLDA1Q8WV24 401 aaPredicted RBP8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 GTSF1LQ9H1H1 148 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 Q9UF83 564 aa8.41□□□□□ -1.06
POLR2J3-210ENST00000504677 GYPEP15421 78 aa8.4□□□□□ -1.06
POLR2J3-210ENST00000504677 PAPPA-AS1Q5QFB9 102 aa8.4□□□□□ -1.06
POLR2J3-210ENST00000504677 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
POLR2J3-210ENST00000504677 Q8N976 141 aa8.4□□□□□ -1.06
POLR2J3-210ENST00000504677 MRAPQ8TCY5 172 aa8.4□□□□□ -1.06
POLR2J3-210ENST00000504677 MGAM2Q2M2H8 2515 aa8.4□□□□□ -1.07
POLR2J3-210ENST00000504677 TRAV12-1A0A0B4J245 112 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 A0A0J9YWU9 116 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 F5H768 121 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 H0Y8G0 127 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 PRSS1P07477 247 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 C12orf74Q32Q52 190 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
POLR2J3-210ENST00000504677 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 H3BNG1 76 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 H7C423 109 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 B9D2Q9BPU9 175 aa8.38□□□□□ -1.07
POLR2J3-210ENST00000504677 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
POLR2J3-210ENST00000504677 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
POLR2J3-210ENST00000504677 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
POLR2J3-210ENST00000504677 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
POLR2J3-210ENST00000504677 VAMP8Q9BV40 100 aa8.37□□□□□ -1.07
POLR2J3-210ENST00000504677 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
POLR2J3-210ENST00000504677 NBEAL1Q6ZS30 2694 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 A0A087WX48 190 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 UBE2L6O14933 153 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 HTN3P15516 51 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 ODF1Q14990 250 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 CDPF1Q6NVV7 123 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 DEFB104AQ8WTQ1 72 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 VSIG2Q96IQ7 327 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
POLR2J3-210ENST00000504677 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 HSBP1L1C9JCN9 74 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 PLNP26678 52 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 PMVKQ15126 192 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 NTM-AS1Q6ZSK4 140 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 NBEAL2Q6ZNJ1 2754 aa8.35□□□□□ -1.07
POLR2J3-210ENST00000504677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 TRAV9-2A0A087WT02 112 aa8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 A0A0J9YY99 117 aa8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 F8VRH5 84 aa8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 DPM2O94777 84 aa8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 ZNF25P17030 456 aaPredicted RBP8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 MRPS36P82909 103 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 Q6ZTC4 211 aa8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-210ENST00000504677 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 TSTD3H0UI37 97 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 IGKCP01834 107 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 PKIAP61925 76 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 DGAT2L7PQ6IED9 249 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 VCX2Q9H322 139 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 CST9LQ9H4G1 147 aa8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
POLR2J3-210ENST00000504677 DEFB131BA0A096LNP1 70 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 TRAV10A0A0B4J240 114 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 FGF6P10767 208 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 TIRAPP58753 221 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 NANOS2P60321 138 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 AMMECR1LQ6DCA0 310 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
POLR2J3-210ENST00000504677 TMEM101Q96IK0 257 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms