RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZNF471Q9BX82 626 aaPredicted RBP7.25□□□□□ -1.25
LSM6-204ENST00000504181 V9GYH0 126 aa7.25□□□□□ -1.25
LSM6-204ENST00000504181 FAM168BA1KXE4 195 aa7.24□□□□□ -1.25
LSM6-204ENST00000504181 APOMO95445 188 aa7.24□□□□□ -1.25
LSM6-204ENST00000504181 NKX2-5P52952 324 aaPredicted RBP7.24□□□□□ -1.25
LSM6-204ENST00000504181 IL15RAQ13261 267 aa7.24□□□□□ -1.25
LSM6-204ENST00000504181 NUP35Q8NFH5 326 aa7.24□□□□□ -1.25
LSM6-204ENST00000504181 PPDPFQ9H3Y8 114 aa7.24□□□□□ -1.25
LSM6-204ENST00000504181 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
LSM6-204ENST00000504181 NAP1L6A6NFF2 107 aa7.23□□□□□ -1.25
LSM6-204ENST00000504181 CCL25O15444 150 aa7.23□□□□□ -1.25
LSM6-204ENST00000504181 SMIM17P0DL12 118 aa7.23□□□□□ -1.25
LSM6-204ENST00000504181 M0QY20 66 aa7.22□□□□□ -1.25
LSM6-204ENST00000504181 MGPP08493 103 aa7.22□□□□□ -1.25
LSM6-204ENST00000504181 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
LSM6-204ENST00000504181 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
LSM6-204ENST00000504181 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
LSM6-204ENST00000504181 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
LSM6-204ENST00000504181 PGLYRP4Q96LB8 373 aa7.22□□□□□ -1.25
LSM6-204ENST00000504181 OPRPNQ99935 248 aaPredicted RBP7.22□□□□□ -1.25
LSM6-204ENST00000504181 GCHFRP30047 84 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 BTCP35070 178 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 UBE2BP63146 152 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 RNASEKQ6P5S7 137 aaKnown RBP7.21□□□□□ -1.26
LSM6-204ENST00000504181 OR5A1Q8NGJ0 315 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 SCGB1C1Q8TD33 95 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 SEC22CQ9BRL7 303 aa7.21□□□□□ -1.26
LSM6-204ENST00000504181 RBM38Q9H0Z9 239 aaKnown RBP7.21□□□□□ -1.26
LSM6-204ENST00000504181 CDC34P49427 236 aaPredicted RBP7.2□□□□□ -1.26
LSM6-204ENST00000504181 COTL1Q14019 142 aa7.2□□□□□ -1.26
LSM6-204ENST00000504181 SUMO4Q6EEV6 95 aa7.2□□□□□ -1.26
LSM6-204ENST00000504181 STAG3L2P0CL84 134 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 STAG3L3P0CL85 134 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 AP1S3Q96PC3 154 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 SMIM3Q9BZL3 60 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 MED28Q9H204 178 aa7.19□□□□□ -1.26
LSM6-204ENST00000504181 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
LSM6-204ENST00000504181 PEX7O00628 323 aa7.18□□□□□ -1.26
LSM6-204ENST00000504181 SNAI2O43623 268 aa7.18□□□□□ -1.26
LSM6-204ENST00000504181 ZNF861PO60384 105 aa7.18□□□□□ -1.26
LSM6-204ENST00000504181 LRRC37A5PQ49AS3 106 aa7.18□□□□□ -1.26
LSM6-204ENST00000504181 COX8CQ7Z4L0 72 aa7.18□□□□□ -1.26
LSM6-204ENST00000504181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
LSM6-204ENST00000504181 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
LSM6-204ENST00000504181 TSHBP01222 138 aa7.17□□□□□ -1.26
LSM6-204ENST00000504181 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
LSM6-204ENST00000504181 SSPOA2VEC9 5147 aa7.17□□□□□ -1.26
LSM6-204ENST00000504181 M0QXV9 152 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 BCL2L11O43521 198 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 KRTAP13-2Q52LG2 175 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
LSM6-204ENST00000504181 H0YIZ8 118 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 OR5AL1P0C617 328 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 MALP21145 153 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 RNF151Q2KHN1 245 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 TRIQKQ629K1 86 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 KRTAP7-1Q8IUC3 87 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 RAB24Q969Q5 203 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 TMEM167BQ9NRX6 74 aa7.15□□□□□ -1.26
LSM6-204ENST00000504181 C19orf71A6NCJ1 209 aa7.14□□□□□ -1.27
LSM6-204ENST00000504181 CENPXA8MT69 81 aa7.14□□□□□ -1.27
LSM6-204ENST00000504181 SS18Q15532 418 aa7.14□□□□□ -1.27
LSM6-204ENST00000504181 CD164L2Q6UWJ8 174 aa7.14□□□□□ -1.27
LSM6-204ENST00000504181 NIT2Q9NQR4 276 aa7.14□□□□□ -1.27
LSM6-204ENST00000504181 HSPB11Q9Y547 144 aa7.14□□□□□ -1.27
LSM6-204ENST00000504181 A0A1W2PRE2 83 aa7.13□□□□□ -1.27
LSM6-204ENST00000504181 UBE2G2P60604 165 aa7.13□□□□□ -1.27
LSM6-204ENST00000504181 UBE2G1P62253 170 aa7.13□□□□□ -1.27
LSM6-204ENST00000504181 CNPY1Q3B7I2 92 aa7.13□□□□□ -1.27
LSM6-204ENST00000504181 C2orf48Q96LS8 159 aa7.13□□□□□ -1.27
LSM6-204ENST00000504181 USH2AO75445 5202 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 SIX6O95475 246 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 CXorf1O96002 111 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 CXCL1P09341 107 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 Q6ZNX1 250 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 FMC1Q96HJ9 113 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 WFDC1Q9HC57 220 aa7.12□□□□□ -1.27
LSM6-204ENST00000504181 ESDP10768 282 aa7.11□□□□□ -1.27
LSM6-204ENST00000504181 NTF3P20783 257 aa7.11□□□□□ -1.27
LSM6-204ENST00000504181 HIST1H2BAQ96A08 127 aa7.11□□□□□ -1.27
LSM6-204ENST00000504181 FCGBPQ9Y6R7 5405 aaPredicted RBP7.1□□□□□ -1.27
LSM6-204ENST00000504181 H7C423 109 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 COX7A2LO14548 114 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 LTAP01374 205 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 S100A5P33763 92 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 GAGE2EQ4V326 116 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 BTF3L4Q96K17 158 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 GAGE2DQ9UEU5 116 aa7.1□□□□□ -1.27
LSM6-204ENST00000504181 APCSP02743 223 aa7.09□□□□□ -1.27
LSM6-204ENST00000504181 ZNF25P17030 456 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms