RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
LPCAT1-203ENST00000503252 CHD6Q8TD26 2715 aa13.69□□□□□ -0.22
LPCAT1-203ENST00000503252 DYNLRB2Q8TF09 96 aa13.68□□□□□ -0.22
LPCAT1-203ENST00000503252 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
LPCAT1-203ENST00000503252 TRBV6-5A0A0K0K1A5 114 aa13.68□□□□□ -0.22
LPCAT1-203ENST00000503252 TRBV27A0A0K0K1C4 114 aa13.68□□□□□ -0.22
LPCAT1-203ENST00000503252 IGLL5B9A064 214 aa13.68□□□□□ -0.22
LPCAT1-203ENST00000503252 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
LPCAT1-203ENST00000503252 NDUFV3P56181 108 aaKnown RBP13.67□□□□□ -0.22
LPCAT1-203ENST00000503252 IGIPA6NJ69 53 aa13.67□□□□□ -0.22
LPCAT1-203ENST00000503252 A8MTW9 85 aa13.67□□□□□ -0.22
LPCAT1-203ENST00000503252 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
LPCAT1-203ENST00000503252 MAP6D1Q9H9H5 199 aa13.67□□□□□ -0.22
LPCAT1-203ENST00000503252 TRAV2A0A0B4J234 112 aa13.66□□□□□ -0.22
LPCAT1-203ENST00000503252 PDZD2O15018 2839 aa13.66□□□□□ -0.22
LPCAT1-203ENST00000503252 A0A1W2PRX2 142 aa13.66□□□□□ -0.22
LPCAT1-203ENST00000503252 IGHV3-73A0A0B4J1V6 119 aa13.64□□□□□ -0.23
LPCAT1-203ENST00000503252 EMP1P54849 157 aa13.64□□□□□ -0.23
LPCAT1-203ENST00000503252 TRPT1Q86TN4 253 aaKnown RBP13.64□□□□□ -0.23
LPCAT1-203ENST00000503252 ATP6V0E2Q8NHE4 81 aa13.64□□□□□ -0.23
LPCAT1-203ENST00000503252 RHODO00212 210 aa13.63□□□□□ -0.23
LPCAT1-203ENST00000503252 ACANP16112 2415 aa13.62□□□□□ -0.23
LPCAT1-203ENST00000503252 IGLV4-69A0A075B6H9 119 aa13.62□□□□□ -0.23
LPCAT1-203ENST00000503252 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
LPCAT1-203ENST00000503252 WNK1Q9H4A3 2382 aa13.62□□□□□ -0.23
LPCAT1-203ENST00000503252 CD28P10747 220 aa13.62□□□□□ -0.23
LPCAT1-203ENST00000503252 PROK1P58294 105 aa13.62□□□□□ -0.23
LPCAT1-203ENST00000503252 C11orf86A6NJI1 115 aa13.61□□□□□ -0.23
LPCAT1-203ENST00000503252 PMVKQ15126 192 aa13.61□□□□□ -0.23
LPCAT1-203ENST00000503252 CEND1Q8N111 149 aa13.61□□□□□ -0.23
LPCAT1-203ENST00000503252 TMEM141Q96I45 108 aa13.61□□□□□ -0.23
LPCAT1-203ENST00000503252 TIMM17AQ99595 171 aa13.61□□□□□ -0.23
LPCAT1-203ENST00000503252 PRADC1Q9BSG0 188 aa13.61□□□□□ -0.23
LPCAT1-203ENST00000503252 MYMXA0A1B0GTQ4 84 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 LINC01549A6NIU2 74 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 P0DMU3 169 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 FAM231AP0DMU4 169 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 FAM231CP0DMU5 169 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 MEIG1Q5JSS6 88 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 GAGE2BQ13066 116 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 GAGE2EQ4V326 116 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 TTC32Q5I0X7 151 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 GAGE2DQ9UEU5 116 aa13.6□□□□□ -0.23
LPCAT1-203ENST00000503252 ITPR2Q14571 2701 aa13.59□□□□□ -0.23
LPCAT1-203ENST00000503252 SMCPP49901 116 aaPredicted RBP13.59□□□□□ -0.23
LPCAT1-203ENST00000503252 OPRPNQ99935 248 aaPredicted RBP13.59□□□□□ -0.23
LPCAT1-203ENST00000503252 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
LPCAT1-203ENST00000503252 LINC01587Q99440 93 aa13.59□□□□□ -0.23
LPCAT1-203ENST00000503252 SETD2Q9BYW2 2564 aaPredicted RBP13.58□□□□□ -0.23
LPCAT1-203ENST00000503252 CCL24O00175 119 aa13.58□□□□□ -0.23
LPCAT1-203ENST00000503252 WIPF1O43516 503 aa13.58□□□□□ -0.23
LPCAT1-203ENST00000503252 IFITM1P13164 125 aa13.58□□□□□ -0.23
LPCAT1-203ENST00000503252 I3L3M4 83 aa13.58□□□□□ -0.24
LPCAT1-203ENST00000503252 M0R2P5 195 aa13.58□□□□□ -0.24
LPCAT1-203ENST00000503252 RHOHQ15669 191 aa13.58□□□□□ -0.24
LPCAT1-203ENST00000503252 ODF3L2Q3SX64 289 aa13.58□□□□□ -0.24
LPCAT1-203ENST00000503252 C3orf56Q8N813 242 aa13.58□□□□□ -0.24
LPCAT1-203ENST00000503252 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 PLA2G2AP14555 144 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 CITED2Q99967 270 aaPredicted RBP13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 ANK3Q12955 4377 aaKnown RBP13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 CFAP126Q5VTH2 177 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 CARD19Q96LW7 228 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 HIST1H4GQ99525 98 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 ZNF415Q09FC8 603 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 Q9UF83 564 aa13.57□□□□□ -0.24
LPCAT1-203ENST00000503252 ZNRF2Q8NHG8 242 aa13.56□□□□□ -0.24
LPCAT1-203ENST00000503252 Q6ZSN1 163 aa13.56□□□□□ -0.24
LPCAT1-203ENST00000503252 C20orf203Q8NBC4 194 aa13.56□□□□□ -0.24
LPCAT1-203ENST00000503252 C11orf72Q8NBR9 251 aa13.56□□□□□ -0.24
LPCAT1-203ENST00000503252 PPDPFLQ8WWR9 84 aa13.56□□□□□ -0.24
LPCAT1-203ENST00000503252 NACAE9PAV3 2078 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 TAL2Q16559 108 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 XCL2Q9UBD3 114 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 MTORP42345 2549 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 NIPBLQ6KC79 2804 aaeCLIP13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 ZNF815PA8K554 130 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 INSP01308 110 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 C12orf74Q32Q52 190 aa13.55□□□□□ -0.24
LPCAT1-203ENST00000503252 TRBV7-3A0A075B6L6 115 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 A8MWV9 139 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 RRN3P1Q2M238 152 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 PAPPA-AS1Q5QFB9 102 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 LINC01006Q8NI28 216 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 HELZ2Q9BYK8 2649 aaKnown RBP13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 J3QKU1 62 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 EDA2RQ9HAV5 297 aa13.54□□□□□ -0.24
LPCAT1-203ENST00000503252 TMEM170BQ5T4T1 132 aa13.53□□□□□ -0.24
LPCAT1-203ENST00000503252 PLEKHB2Q96CS7 222 aa13.53□□□□□ -0.24
LPCAT1-203ENST00000503252 TRAV4A0A0B4J268 109 aa13.53□□□□□ -0.24
LPCAT1-203ENST00000503252 TMEM126AQ9H061 195 aa13.52□□□□□ -0.24
LPCAT1-203ENST00000503252 SNCGO76070 127 aa13.52□□□□□ -0.25
LPCAT1-203ENST00000503252 STHQ8IWL8 128 aa13.52□□□□□ -0.25
LPCAT1-203ENST00000503252 LINC00467Q9BRT7 94 aa13.52□□□□□ -0.25
LPCAT1-203ENST00000503252 SPANXA1Q9NS26 97 aa13.52□□□□□ -0.25
LPCAT1-203ENST00000503252 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
LPCAT1-203ENST00000503252 LOC107984640A0A0U1RRK4 108 aa13.51□□□□□ -0.25
LPCAT1-203ENST00000503252 RNASE1P07998 156 aaKnown RBP13.51□□□□□ -0.25
LPCAT1-203ENST00000503252 HERVK_113P61574 105 aa13.51□□□□□ -0.25
LPCAT1-203ENST00000503252 PIK3CD-AS1Q5SR53 167 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms