RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 TRBV27A0A0K0K1C4 114 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 PRSS29PA6NIE9 313 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 PMCHP20382 165 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
CPNE1-228ENST00000498814 SLC7A5P1Q8MH63 180 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
CPNE1-228ENST00000498814 D6R8Y8 96 aa10.47□□□□□ -0.73
CPNE1-228ENST00000498814 AMTP48728 403 aa10.47□□□□□ -0.73
CPNE1-228ENST00000498814 SUMO2P61956 95 aaKnown RBP10.47□□□□□ -0.73
CPNE1-228ENST00000498814 ELOBQ15370 118 aa10.47□□□□□ -0.73
CPNE1-228ENST00000498814 DEFB104AQ8WTQ1 72 aa10.47□□□□□ -0.73
CPNE1-228ENST00000498814 C20orf78Q9BR46 151 aa10.47□□□□□ -0.73
CPNE1-228ENST00000498814 VCYO14598 125 aa10.46□□□□□ -0.73
CPNE1-228ENST00000498814 TNFRSF6BO95407 300 aa10.46□□□□□ -0.73
CPNE1-228ENST00000498814 GAGE6Q13070 117 aa10.46□□□□□ -0.73
CPNE1-228ENST00000498814 MPV17L2Q567V2 206 aa10.46□□□□□ -0.73
CPNE1-228ENST00000498814 ATRAIDQ6UW56 229 aa10.46□□□□□ -0.73
CPNE1-228ENST00000498814 FAT2Q9NYQ8 4349 aa10.46□□□□□ -0.74
CPNE1-228ENST00000498814 PHOX2AO14813 284 aa10.45□□□□□ -0.74
CPNE1-228ENST00000498814 TSHBP01222 138 aa10.45□□□□□ -0.74
CPNE1-228ENST00000498814 APCSP02743 223 aa10.45□□□□□ -0.74
CPNE1-228ENST00000498814 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
CPNE1-228ENST00000498814 TMEM136Q6ZRR5 245 aa10.45□□□□□ -0.74
CPNE1-228ENST00000498814 ORMDL3Q8N138 153 aa10.45□□□□□ -0.74
CPNE1-228ENST00000498814 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
CPNE1-228ENST00000498814 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
CPNE1-228ENST00000498814 RBX1P62877 108 aa10.44□□□□□ -0.74
CPNE1-228ENST00000498814 TNP2Q05952 138 aa10.44□□□□□ -0.74
CPNE1-228ENST00000498814 PRELID3AQ96N28 172 aa10.44□□□□□ -0.74
CPNE1-228ENST00000498814 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
CPNE1-228ENST00000498814 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 H7C423 109 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 UBE2L6O14933 153 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 NPYP01303 97 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 Q8N976 141 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 Q9HAA7 133 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 LAMTOR2Q9Y2Q5 125 aa10.43□□□□□ -0.74
CPNE1-228ENST00000498814 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
CPNE1-228ENST00000498814 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
CPNE1-228ENST00000498814 ESDP10768 282 aa10.42□□□□□ -0.74
CPNE1-228ENST00000498814 COX19Q49B96 90 aa10.42□□□□□ -0.74
CPNE1-228ENST00000498814 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
CPNE1-228ENST00000498814 GNB1LQ9BYB4 327 aa10.42□□□□□ -0.74
CPNE1-228ENST00000498814 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
CPNE1-228ENST00000498814 FCER1GP30273 86 aa10.41□□□□□ -0.74
CPNE1-228ENST00000498814 Q0VG73 95 aa10.41□□□□□ -0.74
CPNE1-228ENST00000498814 UBE2WQ96B02 151 aa10.41□□□□□ -0.74
CPNE1-228ENST00000498814 SMIM2Q9BVW6 85 aa10.41□□□□□ -0.74
CPNE1-228ENST00000498814 TM2D2Q9BX73 214 aa10.41□□□□□ -0.74
CPNE1-228ENST00000498814 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
CPNE1-228ENST00000498814 TCAPO15273 167 aa10.4□□□□□ -0.74
CPNE1-228ENST00000498814 ENHOQ6UWT2 76 aa10.4□□□□□ -0.74
CPNE1-228ENST00000498814 PRR34Q9NV39 138 aa10.4□□□□□ -0.74
CPNE1-228ENST00000498814 HECTD4Q9Y4D8 3996 aa10.4□□□□□ -0.75
CPNE1-228ENST00000498814 PKD1P98161 4303 aa10.39□□□□□ -0.75
CPNE1-228ENST00000498814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-228ENST00000498814 IGKV2-29A2NJV5 120 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-228ENST00000498814 MT-ND6P03923 174 aa10.39□□□□□ -0.75
CPNE1-228ENST00000498814 C20orf203Q8NBC4 194 aa10.39□□□□□ -0.75
CPNE1-228ENST00000498814 RMI2Q96E14 147 aa10.39□□□□□ -0.75
CPNE1-228ENST00000498814 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
CPNE1-228ENST00000498814 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 TGIF2-C20orf24A0A0A6YYL0 155 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 PSCAO43653 123 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 CRPP02741 224 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 FGF6P10767 208 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-228ENST00000498814 AMMECR1LQ6DCA0 310 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
CPNE1-228ENST00000498814 MIAQ16674 131 aa10.37□□□□□ -0.75
CPNE1-228ENST00000498814 MAP1LC3AQ9H492 121 aa10.37□□□□□ -0.75
CPNE1-228ENST00000498814 REG3AQ06141 175 aa10.36□□□□□ -0.75
CPNE1-228ENST00000498814 KIAA1644Q3SXP7 199 aa10.36□□□□□ -0.75
CPNE1-228ENST00000498814 RNASEKQ6P5S7 137 aaKnown RBP10.36□□□□□ -0.75
CPNE1-228ENST00000498814 MRPL52Q86TS9 123 aaKnown RBP10.36□□□□□ -0.75
CPNE1-228ENST00000498814 YPEL4Q96NS1 127 aa10.36□□□□□ -0.75
CPNE1-228ENST00000498814 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
CPNE1-228ENST00000498814 A0A087WTM6 91 aa10.35□□□□□ -0.75
CPNE1-228ENST00000498814 Q8N8P6 123 aa10.35□□□□□ -0.75
CPNE1-228ENST00000498814 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
CPNE1-228ENST00000498814 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
CPNE1-228ENST00000498814 LOC389332A0A1B0GUA5 103 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 LRCOL1A6NCL2 159 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 EREGO14944 169 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 RAB5AP20339 215 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 SMAGPQ0VAQ4 97 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 CLPSL2Q6UWE3 100 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 TMEM101Q96IK0 257 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 SMCO4Q9NRQ5 59 aa10.34□□□□□ -0.75
CPNE1-228ENST00000498814 DNAH11Q96DT5 4516 aa10.33□□□□□ -0.76
CPNE1-228ENST00000498814 TRAV8-4A0A0B4J246 113 aa10.33□□□□□ -0.76
CPNE1-228ENST00000498814 FABP9Q0Z7S8 132 aa10.33□□□□□ -0.76
CPNE1-228ENST00000498814 MAPKAPK5-AS1Q8N8E1 139 aa10.33□□□□□ -0.76
CPNE1-228ENST00000498814 OR5A1Q8NGJ0 315 aa10.33□□□□□ -0.76
CPNE1-228ENST00000498814 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-228ENST00000498814 CSDC2Q9Y534 153 aaKnown RBP10.33□□□□□ -0.76
CPNE1-228ENST00000498814 K7EMI3 77 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms