RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
ABCF3-218ENST00000498136 NTN5Q8WTR8 489 aaPredicted RBP11.08□□□□□ -0.64
ABCF3-218ENST00000498136 RAB4AP20338 218 aa11.07□□□□□ -0.64
ABCF3-218ENST00000498136 PMCHP20382 165 aa11.07□□□□□ -0.64
ABCF3-218ENST00000498136 GCSHP23434 173 aa11.07□□□□□ -0.64
ABCF3-218ENST00000498136 LINC00269Q8N2A0 174 aa11.07□□□□□ -0.64
ABCF3-218ENST00000498136 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
ABCF3-218ENST00000498136 LRP1BQ9NZR2 4599 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 APCSP02743 223 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 CAMPP49913 170 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 MIAQ16674 131 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 MRAP2Q96G30 205 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 RNF185Q96GF1 192 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 ST20Q9HBF5 79 aa11.06□□□□□ -0.64
ABCF3-218ENST00000498136 DNAH5Q8TE73 4624 aa11.05□□□□□ -0.64
ABCF3-218ENST00000498136 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
ABCF3-218ENST00000498136 I3L3M4 83 aa11.05□□□□□ -0.64
ABCF3-218ENST00000498136 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
ABCF3-218ENST00000498136 NCR2O95944 276 aa11.05□□□□□ -0.64
ABCF3-218ENST00000498136 HERC2O95714 4834 aa11.04□□□□□ -0.64
ABCF3-218ENST00000498136 TRBV6-5A0A0K0K1A5 114 aa11.04□□□□□ -0.64
ABCF3-218ENST00000498136 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
ABCF3-218ENST00000498136 HLA-DQA1P01909 254 aa11.04□□□□□ -0.64
ABCF3-218ENST00000498136 REG3AQ06141 175 aa11.04□□□□□ -0.64
ABCF3-218ENST00000498136 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
ABCF3-218ENST00000498136 MRPL54Q6P161 138 aaKnown RBP11.04□□□□□ -0.64
ABCF3-218ENST00000498136 IGLV4-60A0A075B6I1 120 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.03□□□□□ -0.64
ABCF3-218ENST00000498136 A0A1B0GUV1 79 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 A0A1B0GW15 77 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 IGKV2-29A2NJV5 120 aaPredicted RBP11.03□□□□□ -0.64
ABCF3-218ENST00000498136 PPP1R2P9O14990 202 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 RPS10P46783 165 aaKnown RBP11.03□□□□□ -0.64
ABCF3-218ENST00000498136 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 IFITM2Q01629 132 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 PNRC1Q12796 327 aaPredicted RBP11.03□□□□□ -0.64
ABCF3-218ENST00000498136 C20orf203Q8NBC4 194 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
ABCF3-218ENST00000498136 IGLV10-54A0A075B6I4 117 aa11.02□□□□□ -0.65
ABCF3-218ENST00000498136 FAM104BQ5XKR9 115 aa11.02□□□□□ -0.65
ABCF3-218ENST00000498136 TMEM70Q9BUB7 260 aa11.02□□□□□ -0.65
ABCF3-218ENST00000498136 PPP1R17O96001 155 aa11.01□□□□□ -0.65
ABCF3-218ENST00000498136 S100A8P05109 93 aa11.01□□□□□ -0.65
ABCF3-218ENST00000498136 HBBP68871 147 aa11.01□□□□□ -0.65
ABCF3-218ENST00000498136 MRPL51Q4U2R6 128 aaKnown RBP11.01□□□□□ -0.65
ABCF3-218ENST00000498136 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
ABCF3-218ENST00000498136 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
ABCF3-218ENST00000498136 IGKV3OR2-268A0A0C4DH90 116 aa11□□□□□ -0.65
ABCF3-218ENST00000498136 F8W036 122 aa11□□□□□ -0.65
ABCF3-218ENST00000498136 MT-ND4LP03901 98 aa11□□□□□ -0.65
ABCF3-218ENST00000498136 H7C423 109 aa10.99□□□□□ -0.65
ABCF3-218ENST00000498136 CKS2P33552 79 aa10.99□□□□□ -0.65
ABCF3-218ENST00000498136 POLR2KP53803 58 aaKnown RBP10.99□□□□□ -0.65
ABCF3-218ENST00000498136 C14orf177Q52M58 125 aa10.99□□□□□ -0.65
ABCF3-218ENST00000498136 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
ABCF3-218ENST00000498136 TRAV8-4A0A0B4J246 113 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 TSHBP01222 138 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 FGF6P10767 208 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 FCER1GP30273 86 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 UQCC3Q6UW78 93 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 NRACQ8N912 160 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 BTF3L4Q96K17 158 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 HSPG2P98160 4391 aa10.98□□□□□ -0.65
ABCF3-218ENST00000498136 TRBV27A0A0K0K1C4 114 aa10.97□□□□□ -0.65
ABCF3-218ENST00000498136 LINC00862A6NCI5 91 aa10.97□□□□□ -0.65
ABCF3-218ENST00000498136 USP17L23D6RBM5 183 aa10.97□□□□□ -0.65
ABCF3-218ENST00000498136 VCYO14598 125 aa10.97□□□□□ -0.65
ABCF3-218ENST00000498136 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
ABCF3-218ENST00000498136 TMEM101Q96IK0 257 aa10.97□□□□□ -0.65
ABCF3-218ENST00000498136 RYR1P21817 5038 aa10.97□□□□□ -0.65
ABCF3-218ENST00000498136 A0A1B0GXF2 115 aa10.96□□□□□ -0.65
ABCF3-218ENST00000498136 ATP5L2Q7Z4Y8 100 aa10.96□□□□□ -0.65
ABCF3-218ENST00000498136 KIR2DL4Q99706 377 aa10.96□□□□□ -0.65
ABCF3-218ENST00000498136 APOBP04114 4563 aaKnown RBP10.96□□□□□ -0.66
ABCF3-218ENST00000498136 C7orf77A4D0Y5 90 aa10.95□□□□□ -0.66
ABCF3-218ENST00000498136 D6R8Y8 96 aa10.95□□□□□ -0.66
ABCF3-218ENST00000498136 ESDP10768 282 aa10.95□□□□□ -0.66
ABCF3-218ENST00000498136 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
ABCF3-218ENST00000498136 TMEM218A2RU14 115 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 XGP55808 180 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 HAMPP81172 84 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 LINC01620Q4KN68 170 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 KRTAP26-1Q6PEX3 210 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 COMMD7Q86VX2 200 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 Q8N1X5 172 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 OR5A1Q8NGJ0 315 aa10.94□□□□□ -0.66
ABCF3-218ENST00000498136 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
ABCF3-218ENST00000498136 ADCYAP1P18509 176 aa10.93□□□□□ -0.66
ABCF3-218ENST00000498136 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
ABCF3-218ENST00000498136 DGAT2L7PQ6IED9 249 aa10.92□□□□□ -0.66
ABCF3-218ENST00000498136 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
ABCF3-218ENST00000498136 TRBV24-1A0A075B6N3 115 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 GAGE12HA6NDE8 117 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 PPBPP02775 128 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 PRSS1P07477 247 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 KRTAP4-5Q9BYR2 181 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 FAM30AQ9NZY2 134 aa10.91□□□□□ -0.66
ABCF3-218ENST00000498136 NPYP01303 97 aa10.9□□□□□ -0.66
ABCF3-218ENST00000498136 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms