RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TMEM70Q9BUB7 260 aa13.72□□□□□ -0.21
CTSD-206ENST00000497544 LAMTOR2Q9Y2Q5 125 aa13.72□□□□□ -0.21
CTSD-206ENST00000497544 I3L3M4 83 aa13.71□□□□□ -0.21
CTSD-206ENST00000497544 VCYO14598 125 aa13.71□□□□□ -0.21
CTSD-206ENST00000497544 SIVA1O15304 175 aa13.71□□□□□ -0.21
CTSD-206ENST00000497544 SCO1O75880 301 aa13.71□□□□□ -0.21
CTSD-206ENST00000497544 NPYP01303 97 aa13.71□□□□□ -0.21
CTSD-206ENST00000497544 DEFB104AQ8WTQ1 72 aa13.71□□□□□ -0.21
CTSD-206ENST00000497544 WFDC10BQ8IUB3 73 aa13.7□□□□□ -0.22
CTSD-206ENST00000497544 DYNC1H1Q14204 4646 aaKnown RBP13.69□□□□□ -0.22
CTSD-206ENST00000497544 TRBV25-1A0A075B6N4 114 aa13.69□□□□□ -0.22
CTSD-206ENST00000497544 IGHV1-24A0A0C4DH33 117 aa13.69□□□□□ -0.22
CTSD-206ENST00000497544 NTM-AS1Q6ZSK4 140 aa13.69□□□□□ -0.22
CTSD-206ENST00000497544 TRBV27A0A0K0K1C4 114 aa13.68□□□□□ -0.22
CTSD-206ENST00000497544 IGLV2-18A0A075B6J9 118 aa13.67□□□□□ -0.22
CTSD-206ENST00000497544 AMTP48728 403 aa13.67□□□□□ -0.22
CTSD-206ENST00000497544 KIR2DL4Q99706 377 aa13.67□□□□□ -0.22
CTSD-206ENST00000497544 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
CTSD-206ENST00000497544 MAP1LC3AQ9H492 121 aa13.67□□□□□ -0.22
CTSD-206ENST00000497544 LOC389332A0A1B0GUA5 103 aa13.66□□□□□ -0.22
CTSD-206ENST00000497544 TMEM262E9PQX1 116 aa13.66□□□□□ -0.22
CTSD-206ENST00000497544 FCER1GP30273 86 aa13.66□□□□□ -0.22
CTSD-206ENST00000497544 RPL32P62910 135 aaKnown RBP13.66□□□□□ -0.22
CTSD-206ENST00000497544 IQCJQ1A5X6 159 aa13.66□□□□□ -0.22
CTSD-206ENST00000497544 TMEM243Q9BU79 118 aa13.66□□□□□ -0.22
CTSD-206ENST00000497544 SMIM2Q9BVW6 85 aa13.66□□□□□ -0.22
CTSD-206ENST00000497544 FAT2Q9NYQ8 4349 aa13.64□□□□□ -0.23
CTSD-206ENST00000497544 TRAV9-2A0A087WT02 112 aa13.64□□□□□ -0.23
CTSD-206ENST00000497544 COLCA2A8K830 154 aa13.64□□□□□ -0.23
CTSD-206ENST00000497544 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
CTSD-206ENST00000497544 DNAH10OSP0CZ25 163 aa13.64□□□□□ -0.23
CTSD-206ENST00000497544 NIT1Q86X76 327 aa13.64□□□□□ -0.23
CTSD-206ENST00000497544 ALKBH7Q9BT30 221 aaPredicted RBP13.64□□□□□ -0.23
CTSD-206ENST00000497544 M0R2N4 97 aa13.63□□□□□ -0.23
CTSD-206ENST00000497544 UBE2L6O14933 153 aa13.63□□□□□ -0.23
CTSD-206ENST00000497544 TCAPO15273 167 aa13.63□□□□□ -0.23
CTSD-206ENST00000497544 TSHBP01222 138 aa13.63□□□□□ -0.23
CTSD-206ENST00000497544 PKIAP61925 76 aa13.63□□□□□ -0.23
CTSD-206ENST00000497544 LINC01556Q5JQF7 62 aa13.63□□□□□ -0.23
CTSD-206ENST00000497544 A0A087WX48 190 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 NBDYA0A0U1RRE5 68 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 IGHV3-30P01768 117 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 IGHV3-33P01772 117 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 IGHV3-30-3P0DP02 117 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 IGHV3-30-5P0DP03 117 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 RAB5AP20339 215 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 GAGE6Q13070 117 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 TTC32Q5I0X7 151 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 DNAH11Q96DT5 4516 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 DNAH6Q9C0G6 4158 aa13.62□□□□□ -0.23
CTSD-206ENST00000497544 Q8N8P6 123 aa13.61□□□□□ -0.23
CTSD-206ENST00000497544 NXT2Q9NPJ8 142 aaKnown RBP13.61□□□□□ -0.23
CTSD-206ENST00000497544 DNAH2Q9P225 4427 aa13.61□□□□□ -0.23
CTSD-206ENST00000497544 K7EP13 123 aa13.6□□□□□ -0.23
CTSD-206ENST00000497544 CHCHD7Q9BUK0 85 aa13.6□□□□□ -0.23
CTSD-206ENST00000497544 C10orf126Q8N4M7 172 aa13.59□□□□□ -0.23
CTSD-206ENST00000497544 PRSS3P2Q8NHM4 247 aa13.59□□□□□ -0.23
CTSD-206ENST00000497544 HSPG2P98160 4391 aa13.58□□□□□ -0.24
CTSD-206ENST00000497544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.58□□□□□ -0.24
CTSD-206ENST00000497544 IGKV2-29A2NJV5 120 aaPredicted RBP13.58□□□□□ -0.24
CTSD-206ENST00000497544 H7C423 109 aa13.58□□□□□ -0.24
CTSD-206ENST00000497544 TRGC2P03986 189 aa13.58□□□□□ -0.24
CTSD-206ENST00000497544 ESDP10768 282 aa13.58□□□□□ -0.24
CTSD-206ENST00000497544 IFI27P40305 119 aaPredicted RBP13.57□□□□□ -0.24
CTSD-206ENST00000497544 AMMECR1LQ6DCA0 310 aa13.57□□□□□ -0.24
CTSD-206ENST00000497544 Q8N3U1 123 aa13.57□□□□□ -0.24
CTSD-206ENST00000497544 TMEM18Q96B42 140 aa13.57□□□□□ -0.24
CTSD-206ENST00000497544 MPV17L2Q567V2 206 aa13.56□□□□□ -0.24
CTSD-206ENST00000497544 Q6ZR54 194 aa13.56□□□□□ -0.24
CTSD-206ENST00000497544 K7EMI3 77 aa13.55□□□□□ -0.24
CTSD-206ENST00000497544 RBX1P62877 108 aa13.55□□□□□ -0.24
CTSD-206ENST00000497544 RNASEKQ6P5S7 137 aaKnown RBP13.55□□□□□ -0.24
CTSD-206ENST00000497544 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 ANGP03950 147 aaKnown RBP13.54□□□□□ -0.24
CTSD-206ENST00000497544 LAGE3Q14657 143 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 FA2HQ7L5A8 372 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 Q8N976 141 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 KLK12Q9UKR0 248 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 DNAH17Q9UFH2 4485 aa13.54□□□□□ -0.24
CTSD-206ENST00000497544 FGF6P10767 208 aa13.53□□□□□ -0.24
CTSD-206ENST00000497544 SMAGPQ0VAQ4 97 aa13.53□□□□□ -0.24
CTSD-206ENST00000497544 ORMDL2Q53FV1 153 aa13.53□□□□□ -0.24
CTSD-206ENST00000497544 C20orf203Q8NBC4 194 aa13.53□□□□□ -0.24
CTSD-206ENST00000497544 KRTAP1-5Q9BYS1 174 aa13.53□□□□□ -0.24
CTSD-206ENST00000497544 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.25
CTSD-206ENST00000497544 TMEM101Q96IK0 257 aa13.52□□□□□ -0.25
CTSD-206ENST00000497544 A0A1B0GVY2 172 aa13.51□□□□□ -0.25
CTSD-206ENST00000497544 G0S2P27469 103 aa13.51□□□□□ -0.25
CTSD-206ENST00000497544 C1orf134Q5TEV5 83 aa13.51□□□□□ -0.25
CTSD-206ENST00000497544 DGAT2L7PQ6IED9 249 aa13.51□□□□□ -0.25
CTSD-206ENST00000497544 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
CTSD-206ENST00000497544 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
CTSD-206ENST00000497544 RAB5BP61020 215 aa13.5□□□□□ -0.25
CTSD-206ENST00000497544 PKD1P98161 4303 aa13.49□□□□□ -0.25
CTSD-206ENST00000497544 TRAV8-3A0A0A6YYJ7 113 aa13.49□□□□□ -0.25
CTSD-206ENST00000497544 LINC00614P0C842 121 aa13.49□□□□□ -0.25
CTSD-206ENST00000497544 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
CTSD-206ENST00000497544 RPL39P62891 51 aaKnown RBP13.49□□□□□ -0.25
CTSD-206ENST00000497544 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms