RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 V9GYV3 84 aa13.65□□□□□ -0.22
COL9A2-211ENST00000496215 AMTP48728 403 aa13.63□□□□□ -0.23
COL9A2-211ENST00000496215 MIAQ16674 131 aa13.63□□□□□ -0.23
COL9A2-211ENST00000496215 RPL39LQ96EH5 51 aaKnown RBP13.63□□□□□ -0.23
COL9A2-211ENST00000496215 CLPSL2Q6UWE3 100 aa13.62□□□□□ -0.23
COL9A2-211ENST00000496215 FAT1Q14517 4588 aa13.62□□□□□ -0.23
COL9A2-211ENST00000496215 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-211ENST00000496215 UBE2L6O14933 153 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 Q8N1X5 172 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 LINC00269Q8N2A0 174 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 DEFB104AQ8WTQ1 72 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 TMEM191AQ9H0A3 160 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 PRR34Q9NV39 138 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 DNAH8Q96JB1 4490 aa13.61□□□□□ -0.23
COL9A2-211ENST00000496215 XGP55808 180 aa13.6□□□□□ -0.23
COL9A2-211ENST00000496215 NAT8BQ9UHF3 227 aa13.6□□□□□ -0.23
COL9A2-211ENST00000496215 HLA-DQA1P01909 254 aa13.59□□□□□ -0.23
COL9A2-211ENST00000496215 RIGQ13278 110 aa13.59□□□□□ -0.23
COL9A2-211ENST00000496215 NUP35Q8NFH5 326 aa13.59□□□□□ -0.23
COL9A2-211ENST00000496215 SDHAF1A6NFY7 115 aa13.58□□□□□ -0.24
COL9A2-211ENST00000496215 TMEM70Q9BUB7 260 aa13.58□□□□□ -0.24
COL9A2-211ENST00000496215 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
COL9A2-211ENST00000496215 NCR2O95944 276 aa13.57□□□□□ -0.24
COL9A2-211ENST00000496215 APCSP02743 223 aa13.57□□□□□ -0.24
COL9A2-211ENST00000496215 RAB14P61106 215 aa13.57□□□□□ -0.24
COL9A2-211ENST00000496215 REG3AQ06141 175 aa13.57□□□□□ -0.24
COL9A2-211ENST00000496215 C20orf203Q8NBC4 194 aa13.57□□□□□ -0.24
COL9A2-211ENST00000496215 TRBV6-5A0A0K0K1A5 114 aa13.56□□□□□ -0.24
COL9A2-211ENST00000496215 C14orf177Q52M58 125 aa13.56□□□□□ -0.24
COL9A2-211ENST00000496215 AMN1Q8IY45 258 aa13.56□□□□□ -0.24
COL9A2-211ENST00000496215 MRAP2Q96G30 205 aa13.56□□□□□ -0.24
COL9A2-211ENST00000496215 IGLV4-60A0A075B6I1 120 aa13.55□□□□□ -0.24
COL9A2-211ENST00000496215 SMIM27A0A1W2PRY6 76 aa13.55□□□□□ -0.24
COL9A2-211ENST00000496215 RNF185Q96GF1 192 aa13.55□□□□□ -0.24
COL9A2-211ENST00000496215 ST20Q9HBF5 79 aa13.55□□□□□ -0.24
COL9A2-211ENST00000496215 I3L3M4 83 aa13.54□□□□□ -0.24
COL9A2-211ENST00000496215 RAB4AP20338 218 aa13.54□□□□□ -0.24
COL9A2-211ENST00000496215 GAS8-AS1O95177 125 aa13.53□□□□□ -0.24
COL9A2-211ENST00000496215 PMCHP20382 165 aa13.53□□□□□ -0.24
COL9A2-211ENST00000496215 VPS13BQ7Z7G8 4022 aa13.53□□□□□ -0.24
COL9A2-211ENST00000496215 IGLV10-54A0A075B6I4 117 aa13.52□□□□□ -0.25
COL9A2-211ENST00000496215 USP17L23D6RBM5 183 aa13.52□□□□□ -0.25
COL9A2-211ENST00000496215 HAMPP81172 84 aa13.52□□□□□ -0.25
COL9A2-211ENST00000496215 AMMECR1LQ6DCA0 310 aa13.52□□□□□ -0.25
COL9A2-211ENST00000496215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.51□□□□□ -0.25
COL9A2-211ENST00000496215 TRAV8-4A0A0B4J246 113 aa13.51□□□□□ -0.25
COL9A2-211ENST00000496215 A0A1B0GW15 77 aa13.51□□□□□ -0.25
COL9A2-211ENST00000496215 IGKV2-29A2NJV5 120 aaPredicted RBP13.51□□□□□ -0.25
COL9A2-211ENST00000496215 H7C423 109 aa13.51□□□□□ -0.25
COL9A2-211ENST00000496215 RPS10P46783 165 aaKnown RBP13.51□□□□□ -0.25
COL9A2-211ENST00000496215 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
COL9A2-211ENST00000496215 TMEM242Q9NWH2 141 aa13.5□□□□□ -0.25
COL9A2-211ENST00000496215 EPM2AB3EWF7 344 aa13.49□□□□□ -0.25
COL9A2-211ENST00000496215 SMKR1H3BMG3 65 aa13.49□□□□□ -0.25
COL9A2-211ENST00000496215 TSHBP01222 138 aa13.49□□□□□ -0.25
COL9A2-211ENST00000496215 CAMPP49913 170 aa13.49□□□□□ -0.25
COL9A2-211ENST00000496215 LINC01620Q4KN68 170 aa13.49□□□□□ -0.25
COL9A2-211ENST00000496215 RNASEKQ6P5S7 137 aaKnown RBP13.49□□□□□ -0.25
COL9A2-211ENST00000496215 PPP1R17O96001 155 aa13.48□□□□□ -0.25
COL9A2-211ENST00000496215 FGF6P10767 208 aa13.48□□□□□ -0.25
COL9A2-211ENST00000496215 FAM30AQ9NZY2 134 aa13.48□□□□□ -0.25
COL9A2-211ENST00000496215 TRBV27A0A0K0K1C4 114 aa13.47□□□□□ -0.25
COL9A2-211ENST00000496215 S100A8P05109 93 aa13.47□□□□□ -0.25
COL9A2-211ENST00000496215 ZNF25P17030 456 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-211ENST00000496215 HBBP68871 147 aa13.47□□□□□ -0.25
COL9A2-211ENST00000496215 PNRC1Q12796 327 aaPredicted RBP13.47□□□□□ -0.25
COL9A2-211ENST00000496215 CLLU1Q5K131 121 aa13.47□□□□□ -0.25
COL9A2-211ENST00000496215 FAM104BQ5XKR9 115 aa13.47□□□□□ -0.25
COL9A2-211ENST00000496215 MRPL54Q6P161 138 aaKnown RBP13.47□□□□□ -0.25
COL9A2-211ENST00000496215 Q6ZSA8 131 aa13.47□□□□□ -0.25
COL9A2-211ENST00000496215 PPP1R2P9O14990 202 aa13.46□□□□□ -0.25
COL9A2-211ENST00000496215 POLR2KP53803 58 aaKnown RBP13.46□□□□□ -0.25
COL9A2-211ENST00000496215 MRPL51Q4U2R6 128 aaKnown RBP13.46□□□□□ -0.25
COL9A2-211ENST00000496215 Q5VSD8 79 aa13.46□□□□□ -0.25
COL9A2-211ENST00000496215 NRACQ8N912 160 aa13.46□□□□□ -0.25
COL9A2-211ENST00000496215 IGKV3OR2-268A0A0C4DH90 116 aa13.45□□□□□ -0.26
COL9A2-211ENST00000496215 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
COL9A2-211ENST00000496215 TMEM101Q96IK0 257 aa13.45□□□□□ -0.26
COL9A2-211ENST00000496215 BTF3L4Q96K17 158 aa13.45□□□□□ -0.26
COL9A2-211ENST00000496215 F8W036 122 aa13.44□□□□□ -0.26
COL9A2-211ENST00000496215 SMR3BP02814 79 aaPredicted RBP13.44□□□□□ -0.26
COL9A2-211ENST00000496215 PRSS1P07477 247 aa13.44□□□□□ -0.26
COL9A2-211ENST00000496215 ESDP10768 282 aa13.44□□□□□ -0.26
COL9A2-211ENST00000496215 FCER1GP30273 86 aa13.44□□□□□ -0.26
COL9A2-211ENST00000496215 A0A1B0GXF2 115 aa13.43□□□□□ -0.26
COL9A2-211ENST00000496215 C7orf77A4D0Y5 90 aa13.43□□□□□ -0.26
COL9A2-211ENST00000496215 VCYO14598 125 aa13.43□□□□□ -0.26
COL9A2-211ENST00000496215 SRRM2Q9UQ35 2752 aaKnown RBP13.43□□□□□ -0.26
COL9A2-211ENST00000496215 LINC00862A6NCI5 91 aa13.42□□□□□ -0.26
COL9A2-211ENST00000496215 CKS2P33552 79 aa13.42□□□□□ -0.26
COL9A2-211ENST00000496215 ATP5L2Q7Z4Y8 100 aa13.42□□□□□ -0.26
COL9A2-211ENST00000496215 CLRN3Q8NCR9 226 aa13.42□□□□□ -0.26
COL9A2-211ENST00000496215 OR5A1Q8NGJ0 315 aa13.42□□□□□ -0.26
COL9A2-211ENST00000496215 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
COL9A2-211ENST00000496215 GAGE12HA6NDE8 117 aa13.41□□□□□ -0.26
COL9A2-211ENST00000496215 hDV102S1A0JD36 115 aa13.4□□□□□ -0.26
COL9A2-211ENST00000496215 FAM229AH3BQW9 127 aa13.4□□□□□ -0.26
COL9A2-211ENST00000496215 MT-ND4LP03901 98 aa13.4□□□□□ -0.26
COL9A2-211ENST00000496215 DGAT2L7PQ6IED9 249 aa13.4□□□□□ -0.26
COL9A2-211ENST00000496215 MRPL52Q86TS9 123 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms