RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 SIPA1L3O60292 1781 aaPredicted RBP0.67□□□□□ -2.3
CLTC-208ENST00000496076 EIF4G3O43432 1585 aaKnown RBP0.66□□□□□ -2.3
CLTC-208ENST00000496076 CTXND1A0A1B0GTU2 59 aa0.66□□□□□ -2.3
CLTC-208ENST00000496076 COMMD6Q7Z4G1 85 aa0.66□□□□□ -2.3
CLTC-208ENST00000496076 SVBPQ8N300 66 aa0.66□□□□□ -2.3
CLTC-208ENST00000496076 DOCK1Q14185 1865 aa0.66□□□□□ -2.3
CLTC-208ENST00000496076 WDR7Q9Y4E6 1490 aa0.66□□□□□ -2.3
CLTC-208ENST00000496076 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.3
CLTC-208ENST00000496076 G3V318 75 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 M0R135 149 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 SSSCA1O60232 199 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 MRPS10P82664 201 aaKnown RBP0.65□□□□□ -2.31
CLTC-208ENST00000496076 CYP4F30PQ9H0H9 118 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 LINC00474Q9P2X8 69 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 LENEPQ9Y5L5 61 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 PATJQ8NI35 1801 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 LAMC3Q9Y6N6 1575 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 ROBO1Q9Y6N7 1651 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 MEGF8Q7Z7M0 2845 aa0.65□□□□□ -2.31
CLTC-208ENST00000496076 IFT172Q9UG01 1749 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 TRBV7-3A0A075B6L6 115 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 FAM24AA6NFZ4 105 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 PRH1P02810 166 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 UBE2DNLQ8IWF7 75 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 IER3IP1Q9Y5U9 82 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 PXDNQ92626 1479 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 JMJD1CQ15652 2540 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 PRDM2Q13029 1718 aa0.64□□□□□ -2.31
CLTC-208ENST00000496076 UBE2L5PA0A1B0GUS4 154 aa0.63□□□□□ -2.31
CLTC-208ENST00000496076 UBE2L3P68036 154 aaKnown RBP0.63□□□□□ -2.31
CLTC-208ENST00000496076 WHAMMP3Q1A5X7 153 aa0.63□□□□□ -2.31
CLTC-208ENST00000496076 MYOZ3Q8TDC0 251 aa0.63□□□□□ -2.31
CLTC-208ENST00000496076 NDUFA4L2Q9NRX3 87 aa0.63□□□□□ -2.31
CLTC-208ENST00000496076 PEG3Q9GZU2 1588 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 MYH8P13535 1937 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 IFITM1P13164 125 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 COX6A2Q02221 97 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 SSBP3-AS1Q7Z2R9 100 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 MGST2Q99735 147 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 DPH3P1Q9H4G8 78 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 DYNLRB1Q9NP97 96 aa0.62□□□□□ -2.31
CLTC-208ENST00000496076 PZPP20742 1482 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 KCPQ6ZWJ8 1503 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 C20orf202A1L168 122 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 GNG11P61952 73 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 Q5VV11 94 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 GTF2H5Q6ZYL4 71 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 SMR3AQ99954 134 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 DOCK11Q5JSL3 2073 aa0.61□□□□□ -2.31
CLTC-208ENST00000496076 ZNF815PA8K554 130 aa0.6□□□□□ -2.31
CLTC-208ENST00000496076 NAV3Q8IVL0 2385 aa0.6□□□□□ -2.31
CLTC-208ENST00000496076 DOCK2Q92608 1830 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 UNC13BO14795 1591 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 CHKB-CPT1BH3BT56 60 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 HMGN4O00479 90 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 S100PP25815 95 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 SPINK6Q6UWN8 80 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 SMIM4Q8WVI0 70 aa0.59□□□□□ -2.31
CLTC-208ENST00000496076 F8VRH5 84 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 SPINK8P0C7L1 97 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 SNCAP37840 140 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 ATP5EP56381 51 aaPredicted RBP0.58□□□□□ -2.32
CLTC-208ENST00000496076 HAMPP81172 84 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 TMEM170BQ5T4T1 132 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 BAGE2Q86Y30 109 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 FAM213BQ8TBF2 198 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 FAM135AQ9P2D6 1515 aa0.58□□□□□ -2.32
CLTC-208ENST00000496076 NRKQ7Z2Y5 1582 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 ZNF609O15014 1411 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 C10orf71Q711Q0 1435 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 SCAPERQ9BY12 1400 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 IGLC7A0M8Q6 106 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 DCDP81605 110 aaKnown RBP0.57□□□□□ -2.32
CLTC-208ENST00000496076 AMELXQ99217 191 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 ZNF236Q9UL36 1845 aa0.57□□□□□ -2.32
CLTC-208ENST00000496076 APCP25054 2843 aa0.56□□□□□ -2.32
CLTC-208ENST00000496076 PIN1P1O15428 100 aa0.56□□□□□ -2.32
CLTC-208ENST00000496076 HSD52Q0P140 79 aa0.56□□□□□ -2.32
CLTC-208ENST00000496076 MANBALQ9NQG1 85 aa0.56□□□□□ -2.32
CLTC-208ENST00000496076 UQCR10Q9UDW1 63 aa0.56□□□□□ -2.32
CLTC-208ENST00000496076 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 ATP6V1G2-DDX39BF2Z307 99 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 UQCR11O14957 56 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 APOC3P02656 99 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 SFTA2Q6UW10 78 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 C12orf57Q99622 126 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 TCEAL7Q9BRU2 100 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 SHROOM2Q13796 1616 aa0.55□□□□□ -2.32
CLTC-208ENST00000496076 CADP27708 2225 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 MUC5ACP98088 5654 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 LOC285095A0A1B0GVY8 99 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 PI4KAP42356 2102 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 COX17Q14061 63 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 MYO7AQ13402 2215 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 PSME4Q14997 1843 aa0.54□□□□□ -2.32
CLTC-208ENST00000496076 TTC28Q96AY4 2481 aa0.53□□□□□ -2.32
CLTC-208ENST00000496076 SFT2D2O95562 160 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms