RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 V9GYS6 101 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 COL14A1Q05707 1796 aaKnown RBP0.49□□□□□ -2.33
VPS50-219ENST00000495039 SPHKAPQ2M3C7 1700 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 C3P01024 1663 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 KIF1AQ12756 1690 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 QRICH2Q9H0J4 1663 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 SSC5DA1L4H1 1573 aa0.49□□□□□ -2.33
VPS50-219ENST00000495039 DOCK4Q8N1I0 1966 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 CASP8AP2Q9UKL3 1982 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SCN8AQ9UQD0 1980 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 MAP2P11137 1827 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 PHLPP1O60346 1717 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 CEP152O94986 1710 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 C4BP0C0L5 1744 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 UBR1Q8IWV7 1749 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 NALCNQ8IZF0 1738 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 ZNF727A8MUV8 499 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 TMEM14DPA8MWL7 114 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 IQCF6A8MYZ5 107 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 UMAD1C9J7I0 102 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 ATP6V1G2-DDX39BF2Z307 99 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 LYNX1G3V0Z9 82 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 FXYD1O00168 92 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 CORTO00230 105 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 PIN1P1O15428 100 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 GNG7O60262 68 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SNCGO76070 127 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 MPC2O95563 127 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 CFDP00746 253 aaPredicted RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 TCRAP04437 139 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SLC25A5P05141 298 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 IAPPP10997 89 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SLC25A6P12236 298 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 HTN1P15515 57 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 HIST1H1DP16402 221 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 FGF7P21781 194 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 EFNA4P52798 201 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SNRPD3P62318 126 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 UBA52P62987 128 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 SERF2P84101 59 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 FXYD3Q14802 87 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SMIM21Q3B7S5 101 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 PIGYQ3MUY2 71 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 MORN2Q502X0 79 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 DEFB121Q5J5C9 76 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 CLLU1Q5K131 121 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 NCMAPQ5T1S8 102 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 C10orf128Q5T292 105 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 LINC01590Q5TEZ4 76 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 C10orf113Q5VZT2 155 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 RPL7L1Q6DKI1 246 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 KRTAP26-1Q6PEX3 210 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 UNQ5815/PRO19632Q6UWF5 114 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 ALKAL2Q6UX46 152 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 ZNF818PQ6ZRF7 136 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 Q6ZS92 163 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 BAGE3Q86Y29 109 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 BAGE2Q86Y30 109 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 LINC00269Q8N2A0 174 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SVBPQ8N300 66 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 KCNRGQ8N5I3 272 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 FAM213BQ8TBF2 198 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 MYOZ3Q8TDC0 251 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SMIM4Q8WVI0 70 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 PPP1R1CQ8WVI7 109 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 LSM10Q969L4 123 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 DPH3Q96FX2 82 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 CCL19Q99731 98 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 NABP2Q9BQ15 211 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 LPAR5Q9H1C0 372 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SLC35B3Q9H1N7 401 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 NAA60Q9H7X0 242 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 PROK2Q9HC23 129 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 SMCO4Q9NRQ5 59 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 TMEM167BQ9NRX6 74 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 COA4Q9NYJ1 87 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 METTL1Q9UBP6 276 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 TIMM8BQ9Y5J9 83 aaPredicted RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 HILPDAQ9Y5L2 63 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 MROH2AA6NES4 1674 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 PIK3C2AO00443 1686 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 ZC3H13Q5T200 1668 aaKnown RBP0.48□□□□□ -2.33
VPS50-219ENST00000495039 ROBO1Q9Y6N7 1651 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 MYH10P35580 1976 aa0.48□□□□□ -2.33
VPS50-219ENST00000495039 FMN2Q9NZ56 1722 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 LMO7Q8WWI1 1683 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 KIAA1549Q9HCM3 1950 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 LRRC37A3O60309 1634 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 LRP5O75197 1615 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 PHRF1Q9P1Y6 1649 aaKnown RBP0.47□□□□□ -2.33
VPS50-219ENST00000495039 ALPK3Q96L96 1907 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 A0A0J9YY99 117 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 LOC105371267A0A1B0GV96 52 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 TMEM218A2RU14 115 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 OOSP1A8MZH6 123 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 TMEM262E9PQX1 116 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 SSSCA1O60232 199 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 SPINK4O60575 86 aa0.47□□□□□ -2.33
VPS50-219ENST00000495039 IGLV3-1P01715 115 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms