RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TRGC2P03986 189 aa10.79□□□□□ -0.68
HPS4-216ENST00000493455 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
HPS4-216ENST00000493455 IGHV3-30-5P0DP03 117 aa10.79□□□□□ -0.68
HPS4-216ENST00000493455 GAGE6Q13070 117 aa10.79□□□□□ -0.68
HPS4-216ENST00000493455 IQCJQ1A5X6 159 aa10.79□□□□□ -0.68
HPS4-216ENST00000493455 TRBV27A0A0K0K1C4 114 aa10.78□□□□□ -0.68
HPS4-216ENST00000493455 LCE6AA0A183 80 aa10.78□□□□□ -0.68
HPS4-216ENST00000493455 UBE2L6O14933 153 aa10.78□□□□□ -0.68
HPS4-216ENST00000493455 SIVA1O15304 175 aa10.78□□□□□ -0.68
HPS4-216ENST00000493455 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
HPS4-216ENST00000493455 Q9H8V8 135 aa10.78□□□□□ -0.68
HPS4-216ENST00000493455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
HPS4-216ENST00000493455 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
HPS4-216ENST00000493455 M0R2N4 97 aa10.77□□□□□ -0.69
HPS4-216ENST00000493455 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.69
HPS4-216ENST00000493455 Q8N3U1 123 aa10.77□□□□□ -0.69
HPS4-216ENST00000493455 PRSS3P2Q8NHM4 247 aa10.77□□□□□ -0.69
HPS4-216ENST00000493455 UPK3BQ9BT76 320 aa10.77□□□□□ -0.69
HPS4-216ENST00000493455 ALMS1Q8TCU4 4167 aa10.77□□□□□ -0.69
HPS4-216ENST00000493455 A0A087WX48 190 aa10.75□□□□□ -0.69
HPS4-216ENST00000493455 Q8N8P6 123 aa10.75□□□□□ -0.69
HPS4-216ENST00000493455 RPL32P62910 135 aaKnown RBP10.74□□□□□ -0.69
HPS4-216ENST00000493455 C18orf32Q8TCD1 76 aa10.74□□□□□ -0.69
HPS4-216ENST00000493455 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
HPS4-216ENST00000493455 NXT2Q9NPJ8 142 aaKnown RBP10.74□□□□□ -0.69
HPS4-216ENST00000493455 MPV17L2Q567V2 206 aa10.73□□□□□ -0.69
HPS4-216ENST00000493455 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
HPS4-216ENST00000493455 RNASEKQ6P5S7 137 aaKnown RBP10.73□□□□□ -0.69
HPS4-216ENST00000493455 FA2HQ7L5A8 372 aa10.73□□□□□ -0.69
HPS4-216ENST00000493455 NIT1Q86X76 327 aa10.73□□□□□ -0.69
HPS4-216ENST00000493455 PRSS47A8MTI9 375 aa10.72□□□□□ -0.69
HPS4-216ENST00000493455 Q8N976 141 aa10.72□□□□□ -0.69
HPS4-216ENST00000493455 LYSTQ99698 3801 aa10.72□□□□□ -0.69
HPS4-216ENST00000493455 NBDYA0A0U1RRE5 68 aa10.71□□□□□ -0.69
HPS4-216ENST00000493455 ANGP03950 147 aaKnown RBP10.7□□□□□ -0.7
HPS4-216ENST00000493455 DNAH10OSP0CZ25 163 aa10.7□□□□□ -0.7
HPS4-216ENST00000493455 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
HPS4-216ENST00000493455 LAGE3Q14657 143 aa10.7□□□□□ -0.7
HPS4-216ENST00000493455 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
HPS4-216ENST00000493455 VPS13DQ5THJ4 4388 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 TRAV9-2A0A087WT02 112 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 FGF6P10767 208 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 ESDP10768 282 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
HPS4-216ENST00000493455 PKIAP61925 76 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 RBX1P62877 108 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 ORMDL2Q53FV1 153 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 CLPSL2Q6UWE3 100 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 TMEM18Q96B42 140 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 KLK12Q9UKR0 248 aa10.69□□□□□ -0.7
HPS4-216ENST00000493455 TTC32Q5I0X7 151 aa10.68□□□□□ -0.7
HPS4-216ENST00000493455 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
HPS4-216ENST00000493455 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
HPS4-216ENST00000493455 KRTAP1-5Q9BYS1 174 aa10.68□□□□□ -0.7
HPS4-216ENST00000493455 IGLV4-60A0A075B6I1 120 aa10.67□□□□□ -0.7
HPS4-216ENST00000493455 IGKV3OR2-268A0A0C4DH90 116 aa10.67□□□□□ -0.7
HPS4-216ENST00000493455 TMEM101Q96IK0 257 aa10.67□□□□□ -0.7
HPS4-216ENST00000493455 Q9HAA7 133 aa10.67□□□□□ -0.7
HPS4-216ENST00000493455 DNAH1Q9P2D7 4330 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 C1orf196B1AJZ1 125 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 H7C423 109 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 CRPP02741 224 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 LINC00614P0C842 121 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 RAB5BP61020 215 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 PMCHL1Q16048 86 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 C10orf126Q8N4M7 172 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 OR5A1Q8NGJ0 315 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 URB1-AS1Q96HZ7 61 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 AP5S1Q9NUS5 200 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 CYSLTR1Q9Y271 337 aa10.66□□□□□ -0.7
HPS4-216ENST00000493455 RNASE13Q5GAN3 156 aaKnown RBP10.65□□□□□ -0.7
HPS4-216ENST00000493455 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
HPS4-216ENST00000493455 UBE2D4Q9Y2X8 147 aa10.65□□□□□ -0.7
HPS4-216ENST00000493455 K7EMI3 77 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BKO60814 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BJP06899 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BOP23527 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BBP33778 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BDP58876 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BCP62807 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 SMAGPQ0VAQ4 97 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST2H2BEQ16778 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.64□□□□□ -0.71
HPS4-216ENST00000493455 LINC00269Q8N2A0 174 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BHQ93079 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BNQ99877 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 HIST1H2BMQ99879 126 aa10.64□□□□□ -0.71
HPS4-216ENST00000493455 ZNF25P17030 456 aaPredicted RBP10.63□□□□□ -0.71
HPS4-216ENST00000493455 Q0VG73 95 aa10.63□□□□□ -0.71
HPS4-216ENST00000493455 Q6ZR54 194 aa10.63□□□□□ -0.71
HPS4-216ENST00000493455 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
HPS4-216ENST00000493455 HYDINQ4G0P3 5121 aa10.63□□□□□ -0.71
HPS4-216ENST00000493455 A0A1B0GUV1 79 aa10.62□□□□□ -0.71
HPS4-216ENST00000493455 IBA57-AS1B1ANH7 110 aa10.62□□□□□ -0.71
HPS4-216ENST00000493455 SERF1AO75920 110 aa10.62□□□□□ -0.71
HPS4-216ENST00000493455 Q6ZUT4 128 aa10.62□□□□□ -0.71
HPS4-216ENST00000493455 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
HPS4-216ENST00000493455 LINC01546A6NGU7 62 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms