RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 BORCS7Q96B45 105 aa9.97□□□□□ -0.81
USP39-217ENST00000491659 TMEM70Q9BUB7 260 aa9.97□□□□□ -0.81
USP39-217ENST00000491659 MIAQ16674 131 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 FRZBQ92765 325 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 PGLYRP4Q96LB8 373 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
USP39-217ENST00000491659 EPM2AB3EWF7 344 aa9.95□□□□□ -0.82
USP39-217ENST00000491659 RBX1P62877 108 aa9.95□□□□□ -0.82
USP39-217ENST00000491659 RHEBQ15382 184 aa9.95□□□□□ -0.82
USP39-217ENST00000491659 TMEM243Q9BU79 118 aa9.95□□□□□ -0.82
USP39-217ENST00000491659 RPS10P5Q9NQ39 176 aa9.95□□□□□ -0.82
USP39-217ENST00000491659 HLA-DQA1P01909 254 aa9.94□□□□□ -0.82
USP39-217ENST00000491659 COTL1Q14019 142 aa9.94□□□□□ -0.82
USP39-217ENST00000491659 C14orf177Q52M58 125 aa9.94□□□□□ -0.82
USP39-217ENST00000491659 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
USP39-217ENST00000491659 TRAV26-2A0A0B4J265 109 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 C7orf77A4D0Y5 90 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 UBE2L6O14933 153 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 AMTP48728 403 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 PNRC1Q12796 327 aaPredicted RBP9.93□□□□□ -0.82
USP39-217ENST00000491659 GATD1Q8NB37 220 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 OSTCQ9NRP0 149 aa9.93□□□□□ -0.82
USP39-217ENST00000491659 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
USP39-217ENST00000491659 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
USP39-217ENST00000491659 GFRA4Q9GZZ7 299 aa9.92□□□□□ -0.82
USP39-217ENST00000491659 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
USP39-217ENST00000491659 TMA7Q9Y2S6 64 aaKnown RBP9.92□□□□□ -0.82
USP39-217ENST00000491659 A0A1B0GUT8 65 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 FAM231BA6NCW3 169 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 HIGD1CA8MV81 97 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 HAMPP81172 84 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 Q5VSD8 79 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 NAT8Q9UHE5 227 aa9.91□□□□□ -0.82
USP39-217ENST00000491659 A0A1B0GUV1 79 aa9.9□□□□□ -0.82
USP39-217ENST00000491659 REG3AQ06141 175 aa9.9□□□□□ -0.82
USP39-217ENST00000491659 ISOC2Q96AB3 205 aa9.9□□□□□ -0.82
USP39-217ENST00000491659 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
USP39-217ENST00000491659 NCR2O95944 276 aa9.89□□□□□ -0.83
USP39-217ENST00000491659 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
USP39-217ENST00000491659 ADIRFQ15847 76 aa9.89□□□□□ -0.83
USP39-217ENST00000491659 C20orf203Q8NBC4 194 aa9.89□□□□□ -0.83
USP39-217ENST00000491659 ABCA13Q86UQ4 5058 aa9.89□□□□□ -0.83
USP39-217ENST00000491659 SDHAF1A6NFY7 115 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 APCSP02743 223 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 RPL23P62829 140 aaKnown RBP9.88□□□□□ -0.83
USP39-217ENST00000491659 CTDSP1Q9GZU7 261 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 TMEM191AQ9H0A3 160 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 V9GYV3 84 aa9.88□□□□□ -0.83
USP39-217ENST00000491659 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 MT-ND4LP03901 98 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 CBLN2Q8IUK8 224 aa9.87□□□□□ -0.83
USP39-217ENST00000491659 RIGQ13278 110 aa9.86□□□□□ -0.83
USP39-217ENST00000491659 AMMECR1LQ6DCA0 310 aa9.86□□□□□ -0.83
USP39-217ENST00000491659 Q6ZSA8 131 aa9.86□□□□□ -0.83
USP39-217ENST00000491659 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
USP39-217ENST00000491659 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 I3L3M4 83 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 PMCHP20382 165 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 NUP35Q8NFH5 326 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 MRAP2Q96G30 205 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 ST20Q9HBF5 79 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
USP39-217ENST00000491659 H7C423 109 aa9.84□□□□□ -0.83
USP39-217ENST00000491659 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
USP39-217ENST00000491659 AMN1Q8IY45 258 aa9.84□□□□□ -0.83
USP39-217ENST00000491659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.83□□□□□ -0.84
USP39-217ENST00000491659 IGKV2-29A2NJV5 120 aaPredicted RBP9.83□□□□□ -0.84
USP39-217ENST00000491659 PRSS1P07477 247 aa9.83□□□□□ -0.84
USP39-217ENST00000491659 INAFM2P0DMQ5 153 aa9.83□□□□□ -0.84
USP39-217ENST00000491659 RAB4AP20338 218 aa9.83□□□□□ -0.84
USP39-217ENST00000491659 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
USP39-217ENST00000491659 ANAPC16Q96DE5 110 aa9.83□□□□□ -0.84
USP39-217ENST00000491659 RNF185Q96GF1 192 aa9.83□□□□□ -0.84
USP39-217ENST00000491659 DNAH8Q96JB1 4490 aa9.83□□□□□ -0.84
USP39-217ENST00000491659 IGKV3OR2-268A0A0C4DH90 116 aa9.82□□□□□ -0.84
USP39-217ENST00000491659 COLCA2A8K830 154 aa9.82□□□□□ -0.84
USP39-217ENST00000491659 PPP1R2P9O14990 202 aa9.82□□□□□ -0.84
USP39-217ENST00000491659 FGF6P10767 208 aa9.82□□□□□ -0.84
USP39-217ENST00000491659 GAS8-AS1O95177 125 aa9.81□□□□□ -0.84
USP39-217ENST00000491659 ZNF25P17030 456 aaPredicted RBP9.81□□□□□ -0.84
USP39-217ENST00000491659 S100PP25815 95 aa9.81□□□□□ -0.84
USP39-217ENST00000491659 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
USP39-217ENST00000491659 DGAT2L7PQ6IED9 249 aa9.81□□□□□ -0.84
USP39-217ENST00000491659 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
USP39-217ENST00000491659 BTF3L4Q96K17 158 aa9.81□□□□□ -0.84
USP39-217ENST00000491659 SMIM27A0A1W2PRY6 76 aa9.8□□□□□ -0.84
USP39-217ENST00000491659 PPP1R17O96001 155 aa9.8□□□□□ -0.84
USP39-217ENST00000491659 TSHBP01222 138 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms