RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	LCE2A	Q5TA79	106 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	AMMECR1L	Q6DCA0	310 aa		11.73	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	MED28	Q9H204	178 aa		11.73	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	PTTG1IP	P53801	180 aa		11.72	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	FOXI1	Q12951	378 aa		11.72	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	BAGE2	Q86Y30	109 aa		11.72	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	FER1L6-AS1	Q8NA97	138 aa		11.72	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	DIRC1	Q969H9	104 aa		11.72	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	MLST8	Q9BVC4	326 aa		11.72	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	FAT4	Q6V0I7	4981 aa		11.71	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	IGHV1-58	A0A0C4DH39	117 aa		11.71	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	SYCN	Q0VAF6	134 aa		11.71	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	AKR1C8P	Q5T2L2	129 aa		11.71	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	S100Z	Q8WXG8	99 aa		11.71	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	LINC00526	Q96FQ7	95 aa		11.71	□□□□□ -0.53
CDK5RAP2-218	ENST00000491334	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.7	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	GAGE2B	Q13066	116 aa		11.7	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	C1orf137	Q5JT78	98 aa		11.7	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	LINC00299	Q6ZSB3	139 aa		11.7	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	LOC107984640	A0A0U1RRK4	108 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334		A0A1W2PNN7	141 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	MAP1LC3B2	A6NCE7	125 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	ZNF561-AS1	K7EIQ3	104 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	UPK1B	O75841	260 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	RPL7L1	Q6DKI1	246 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	RNASEK	Q6P5S7	137 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	TPPP3	Q9BW30	176 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	MAP1LC3B	Q9GZQ8	125 aa		11.69	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	XCL1	P47992	114 aa		11.68	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	IGLV1-50	A0A075B6I6	118 aa		11.67	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334		H7C423	109 aa		11.67	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	PAGE4	O60829	102 aa		11.66	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	OR5A1	Q8NGJ0	315 aa		11.66	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	ISOC2	Q96AB3	205 aa		11.66	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	NDUFA13	Q9P0J0	144 aa		11.66	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	TRGC1	P0CF51	173 aa		11.65	□□□□□ -0.54
CDK5RAP2-218	ENST00000491334	CCL25	O15444	150 aa		11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	IGLV7-43	P04211	117 aa		11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	IGLC6	P0CF74	106 aa		11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	FGF6	P10767	208 aa		11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	NTF3	P20783	257 aa		11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	RPS20	P60866	119 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	IFITM3	Q01628	133 aa		11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	C9orf116	Q5BN46	136 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334		F2Z2F3	143 aa		11.63	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	NCR2	O95944	276 aa		11.63	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	TMUB2	Q71RG4	321 aa		11.63	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	TRAV1-1	A0A0B4J248	108 aa		11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	LINC00959	A0A1B0GUT2	108 aa		11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	SCO2	A0A1W2PP80	73 aa		11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334		H0Y9J4	135 aa		11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	CAMP	P49913	170 aa		11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	BTF3L4	Q96K17	158 aa		11.62	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	ZNF25	P17030	456 aa	Predicted RBP	11.61	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	EIF5A	P63241	154 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	SS18	Q15532	418 aa		11.61	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	PHF5A	Q7RTV0	110 aa	Known RBP	11.61	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	TMEM101	Q96IK0	257 aa		11.61	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	IGLV4-69	A0A075B6H9	119 aa		11.6	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	PFDN1	O60925	122 aa		11.6	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	UBE2D1	P51668	147 aa		11.6	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334		Q6ZNX1	250 aa		11.6	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	OR2D3	Q8NGH3	330 aa		11.6	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	XKRY2	A2RUG3	117 aa		11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	APOM	O95445	188 aa		11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	APCS	P02743	223 aa		11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	BCL2	P10415	239 aa		11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	RPL13A	P40429	203 aa	Known RBP	11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	DEFA1	P59665	94 aa		11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334	CD164L2	Q6UWJ8	174 aa		11.59	□□□□□ -0.55
CDK5RAP2-218	ENST00000491334		A0A087WZ39	114 aa		11.58	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	NUP35	Q8NFH5	326 aa		11.58	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334		Q5BKY6	102 aa		11.57	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	LYZL1	Q6UWQ5	148 aa		11.57	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	GATD1	Q8NB37	220 aa		11.57	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	TSKU	Q8WUA8	353 aa		11.57	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	MAL	P21145	153 aa		11.56	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	RPL35	P42766	123 aa	Known RBP	11.56	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	EIF5AL1	Q6IS14	154 aa	Known RBP	11.56	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	SFT2D1	Q8WV19	159 aa		11.56	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	CAMK2N2	Q96S95	79 aa		11.56	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	RPL18A	Q02543	176 aa	Known RBP	11.55	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	ALG5	Q9Y673	324 aa		11.55	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	IFNA1	P01562	189 aa		11.54	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	KRTAP1-4	P0C5Y4	121 aa		11.54	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	MEF2B	Q02080	365 aa	Predicted RBP	11.54	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	FXYD6-FXYD2	A0A087WZ82	144 aa		11.53	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	C9orf62	Q8N4C0	152 aa		11.53	□□□□□ -0.56
CDK5RAP2-218	ENST00000491334	C19orf71	A6NCJ1	209 aa		11.52	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	PMCH	P20382	165 aa		11.52	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	TWIST1	Q15672	202 aa		11.52	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	MBD3L1	Q8WWY6	194 aa		11.52	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	C2orf48	Q96LS8	159 aa		11.52	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334		A0A1B0GV50	99 aa		11.51	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	SDHAF1	A6NFY7	115 aa		11.51	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	COX7A2L	O14548	114 aa		11.51	□□□□□ -0.57
CDK5RAP2-218	ENST00000491334	KCNRG	Q8N5I3	272 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms