RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 A0A1B0GUT8 65 aa10.9□□□□□ -0.66
PDLIM2-217ENST00000491330 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
PDLIM2-217ENST00000491330 AMTP48728 403 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 RAB14P61106 215 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 DGAT2L7PQ6IED9 249 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 CLRN3Q8NCR9 226 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 LRP1BQ9NZR2 4599 aa10.89□□□□□ -0.67
PDLIM2-217ENST00000491330 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
PDLIM2-217ENST00000491330 HIGD1CA8MV81 97 aa10.88□□□□□ -0.67
PDLIM2-217ENST00000491330 HAMPP81172 84 aa10.88□□□□□ -0.67
PDLIM2-217ENST00000491330 REG3AQ06141 175 aa10.88□□□□□ -0.67
PDLIM2-217ENST00000491330 USP17L23D6RBM5 183 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 NCR2O95944 276 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 AMMECR1LQ6DCA0 310 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 AP5S1Q9NUS5 200 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 PRR34Q9NV39 138 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 FAM30AQ9NZY2 134 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 NAT8BQ9UHF3 227 aa10.87□□□□□ -0.67
PDLIM2-217ENST00000491330 DNAH5Q8TE73 4624 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 A0A1B0GW15 77 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 PPP1R17O96001 155 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 RIGQ13278 110 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 CLPSL2Q6UWE3 100 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 Q6ZSA8 131 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 V9GYV3 84 aa10.86□□□□□ -0.67
PDLIM2-217ENST00000491330 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.85□□□□□ -0.67
PDLIM2-217ENST00000491330 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
PDLIM2-217ENST00000491330 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
PDLIM2-217ENST00000491330 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
PDLIM2-217ENST00000491330 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
PDLIM2-217ENST00000491330 H7C423 109 aa10.84□□□□□ -0.67
PDLIM2-217ENST00000491330 ADIRFQ15847 76 aa10.84□□□□□ -0.67
PDLIM2-217ENST00000491330 LINC00528Q8N1L1 170 aa10.84□□□□□ -0.67
PDLIM2-217ENST00000491330 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
PDLIM2-217ENST00000491330 PNRC1Q12796 327 aaPredicted RBP10.83□□□□□ -0.68
PDLIM2-217ENST00000491330 BTF3L4Q96K17 158 aa10.83□□□□□ -0.68
PDLIM2-217ENST00000491330 HSPG2P98160 4391 aa10.83□□□□□ -0.68
PDLIM2-217ENST00000491330 J3QL48 77 aa10.82□□□□□ -0.68
PDLIM2-217ENST00000491330 S100A8P05109 93 aa10.82□□□□□ -0.68
PDLIM2-217ENST00000491330 PMCHP20382 165 aa10.82□□□□□ -0.68
PDLIM2-217ENST00000491330 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
PDLIM2-217ENST00000491330 DEFB104AQ8WTQ1 72 aa10.82□□□□□ -0.68
PDLIM2-217ENST00000491330 TMEM101Q96IK0 257 aa10.82□□□□□ -0.68
PDLIM2-217ENST00000491330 IGLV10-54A0A075B6I4 117 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 SMIM27A0A1W2PRY6 76 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 hDV102S1A0JD36 115 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 C9JQL5 133 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 PPP1R2P9O14990 202 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 APCSP02743 223 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 RNASEKQ6P5S7 137 aaKnown RBP10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 SCXQ7RTU7 201 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 NUP35Q8NFH5 326 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 DPH3Q96FX2 82 aa10.81□□□□□ -0.68
PDLIM2-217ENST00000491330 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
PDLIM2-217ENST00000491330 SRSF3P84103 164 aaKnown RBP10.8□□□□□ -0.68
PDLIM2-217ENST00000491330 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
PDLIM2-217ENST00000491330 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
PDLIM2-217ENST00000491330 I3L3M4 83 aa10.79□□□□□ -0.68
PDLIM2-217ENST00000491330 SMAGPQ0VAQ4 97 aa10.79□□□□□ -0.68
PDLIM2-217ENST00000491330 CLLU1Q5K131 121 aa10.79□□□□□ -0.68
PDLIM2-217ENST00000491330 ST20Q9HBF5 79 aa10.79□□□□□ -0.68
PDLIM2-217ENST00000491330 ABCA13Q86UQ4 5058 aa10.78□□□□□ -0.68
PDLIM2-217ENST00000491330 LINC00862A6NCI5 91 aa10.78□□□□□ -0.68
PDLIM2-217ENST00000491330 PRSS1P07477 247 aa10.78□□□□□ -0.68
PDLIM2-217ENST00000491330 ZNF25P17030 456 aaPredicted RBP10.78□□□□□ -0.68
PDLIM2-217ENST00000491330 RAB4AP20338 218 aa10.78□□□□□ -0.68
PDLIM2-217ENST00000491330 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
PDLIM2-217ENST00000491330 IGLV4-60A0A075B6I1 120 aa10.77□□□□□ -0.69
PDLIM2-217ENST00000491330 IGKV3OR2-268A0A0C4DH90 116 aa10.77□□□□□ -0.69
PDLIM2-217ENST00000491330 F8W036 122 aa10.77□□□□□ -0.69
PDLIM2-217ENST00000491330 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
PDLIM2-217ENST00000491330 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 TRBV27A0A0K0K1C4 114 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 TCAPO15273 167 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 UQCC3Q6UW78 93 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 ATP5L2Q7Z4Y8 100 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 ANAPC16Q96DE5 110 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 RNF185Q96GF1 192 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
PDLIM2-217ENST00000491330 APOBP04114 4563 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-217ENST00000491330 CNBPP62633 177 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-217ENST00000491330 AMN1Q8IY45 258 aa10.75□□□□□ -0.69
PDLIM2-217ENST00000491330 GAGE12HA6NDE8 117 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 VCYO14598 125 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 FGF6P10767 208 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 FCER1GP30273 86 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 POLR2KP53803 58 aaKnown RBP10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 HBBP68871 147 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 FAM104BQ5XKR9 115 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 OR5A1Q8NGJ0 315 aa10.74□□□□□ -0.69
PDLIM2-217ENST00000491330 PPBPP02775 128 aa10.73□□□□□ -0.69
PDLIM2-217ENST00000491330 MT-ND4LP03901 98 aa10.73□□□□□ -0.69
PDLIM2-217ENST00000491330 RPL32P62910 135 aaKnown RBP10.73□□□□□ -0.69
PDLIM2-217ENST00000491330 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
PDLIM2-217ENST00000491330 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms