RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PGLYRP4Q96LB8 373 aa8□□□□□ -1.13
EXOSC3-207ENST00000490516 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
EXOSC3-207ENST00000490516 NUDT15Q9NV35 164 aa8□□□□□ -1.13
EXOSC3-207ENST00000490516 ZFP30Q9Y2G7 519 aa8□□□□□ -1.13
EXOSC3-207ENST00000490516 IGLV4-69A0A075B6H9 119 aa7.99□□□□□ -1.13
EXOSC3-207ENST00000490516 CCL25O15444 150 aa7.99□□□□□ -1.13
EXOSC3-207ENST00000490516 SNAI2O43623 268 aa7.99□□□□□ -1.13
EXOSC3-207ENST00000490516 NUP35Q8NFH5 326 aa7.99□□□□□ -1.13
EXOSC3-207ENST00000490516 TMEM167BQ9NRX6 74 aa7.99□□□□□ -1.13
EXOSC3-207ENST00000490516 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 A0A1W2PRE2 83 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 FAM168BA1KXE4 195 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 APOMO95445 188 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 COTL1Q14019 142 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 ISOC2Q96AB3 205 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
EXOSC3-207ENST00000490516 A0A087X002 238 aa7.97□□□□□ -1.13
EXOSC3-207ENST00000490516 PLA2G10O15496 165 aa7.97□□□□□ -1.13
EXOSC3-207ENST00000490516 CXorf1O96002 111 aa7.97□□□□□ -1.13
EXOSC3-207ENST00000490516 UBE2G2P60604 165 aa7.97□□□□□ -1.13
EXOSC3-207ENST00000490516 RNASEKQ6P5S7 137 aaKnown RBP7.97□□□□□ -1.13
EXOSC3-207ENST00000490516 OR5A1Q8NGJ0 315 aa7.97□□□□□ -1.13
EXOSC3-207ENST00000490516 NOL3O60936 208 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-207ENST00000490516 OR5AL1P0C617 328 aa7.96□□□□□ -1.14
EXOSC3-207ENST00000490516 OPRPNQ99935 248 aaPredicted RBP7.96□□□□□ -1.14
EXOSC3-207ENST00000490516 MED28Q9H204 178 aa7.96□□□□□ -1.14
EXOSC3-207ENST00000490516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 LINC00959A0A1B0GUT2 108 aa7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 IGKV2-29A2NJV5 120 aaPredicted RBP7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 IL7P13232 177 aa7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 RASL11AQ6T310 242 aa7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 FMC1Q96HJ9 113 aa7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 CAMK2N2Q96S95 79 aa7.95□□□□□ -1.14
EXOSC3-207ENST00000490516 LYRM1O43325 122 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 LTAP01374 205 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 CXCL1P09341 107 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 H2AFB2P0C5Z0 115 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 UBE2G1P62253 170 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 EIF5AL1Q6IS14 154 aaKnown RBP7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 FAM19A5Q7Z5A7 132 aaPredicted RBP7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 HIST1H2BAQ96A08 127 aa7.94□□□□□ -1.14
EXOSC3-207ENST00000490516 NIT2Q9NQR4 276 aa7.93□□□□□ -1.14
EXOSC3-207ENST00000490516 FAM74A7A6NL05 159 aa7.92□□□□□ -1.14
EXOSC3-207ENST00000490516 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
EXOSC3-207ENST00000490516 Q6ZNX1 250 aa7.92□□□□□ -1.14
EXOSC3-207ENST00000490516 PPP1R1CQ8WVI7 109 aa7.92□□□□□ -1.14
EXOSC3-207ENST00000490516 BCL2L11O43521 198 aa7.91□□□□□ -1.14
EXOSC3-207ENST00000490516 NTF3P20783 257 aa7.91□□□□□ -1.14
EXOSC3-207ENST00000490516 UBE2BP63146 152 aa7.91□□□□□ -1.14
EXOSC3-207ENST00000490516 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
EXOSC3-207ENST00000490516 LINC00173Q6ZV60 143 aa7.91□□□□□ -1.14
EXOSC3-207ENST00000490516 KRTAP7-1Q8IUC3 87 aa7.91□□□□□ -1.14
EXOSC3-207ENST00000490516 ZNF861PO60384 105 aa7.9□□□□□ -1.14
EXOSC3-207ENST00000490516 ATP6V0CP27449 155 aa7.9□□□□□ -1.14
EXOSC3-207ENST00000490516 ASB16-AS1Q495Z4 193 aa7.9□□□□□ -1.14
EXOSC3-207ENST00000490516 ACTR3CQ9C0K3 210 aaPredicted RBP7.9□□□□□ -1.14
EXOSC3-207ENST00000490516 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
EXOSC3-207ENST00000490516 MPC2O95563 127 aa7.89□□□□□ -1.15
EXOSC3-207ENST00000490516 MALP21145 153 aa7.89□□□□□ -1.15
EXOSC3-207ENST00000490516 SS18Q15532 418 aa7.89□□□□□ -1.15
EXOSC3-207ENST00000490516 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
EXOSC3-207ENST00000490516 H7C423 109 aa7.88□□□□□ -1.15
EXOSC3-207ENST00000490516 M0QXV9 152 aa7.88□□□□□ -1.15
EXOSC3-207ENST00000490516 H2BFSP57053 126 aa7.88□□□□□ -1.15
EXOSC3-207ENST00000490516 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
EXOSC3-207ENST00000490516 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 MBP02144 154 aa7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 ZNF726P1Q15940 193 aa7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 RNF151Q2KHN1 245 aa7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 PSMG3Q9BT73 122 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 TPPP3Q9BW30 176 aa7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 NKX6-2Q9C056 277 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 ANAPC11Q9NYG5 84 aa7.87□□□□□ -1.15
EXOSC3-207ENST00000490516 CCDC160A6NGH7 325 aa7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 APCSP02743 223 aa7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 ESDP10768 282 aa7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 ZNF25P17030 456 aaPredicted RBP7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 MT1HP80294 61 aa7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 TMEM101Q96IK0 257 aa7.86□□□□□ -1.15
EXOSC3-207ENST00000490516 COX7A2LO14548 114 aa7.85□□□□□ -1.15
EXOSC3-207ENST00000490516 AKR1C3P42330 323 aa7.85□□□□□ -1.15
EXOSC3-207ENST00000490516 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
EXOSC3-207ENST00000490516 BTF3L4Q96K17 158 aa7.85□□□□□ -1.15
EXOSC3-207ENST00000490516 NCR2O95944 276 aa7.84□□□□□ -1.15
EXOSC3-207ENST00000490516 TSHBP01222 138 aa7.84□□□□□ -1.15
EXOSC3-207ENST00000490516 PET100P0DJ07 73 aa7.84□□□□□ -1.15
EXOSC3-207ENST00000490516 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-207ENST00000490516 SERF2P84101 59 aa7.84□□□□□ -1.15
EXOSC3-207ENST00000490516 TNFSF18Q9UNG2 199 aa7.84□□□□□ -1.15
EXOSC3-207ENST00000490516 CFC1BP0CG36 223 aa7.83□□□□□ -1.16
EXOSC3-207ENST00000490516 DEFA1P59665 94 aa7.83□□□□□ -1.16
EXOSC3-207ENST00000490516 GAGE2EQ4V326 116 aa7.83□□□□□ -1.16
EXOSC3-207ENST00000490516 GAGE2DQ9UEU5 116 aa7.83□□□□□ -1.16
EXOSC3-207ENST00000490516 FAM240BA0A1B0GVZ2 78 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 INMT-MINDY4F8WBC2 141 aa7.82□□□□□ -1.16
EXOSC3-207ENST00000490516 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms