RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TMEM242Q9NWH2 141 aa12.46□□□□□ -0.41
PTCD3-217ENST00000488801 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
PTCD3-217ENST00000488801 ST20Q9HBF5 79 aa12.45□□□□□ -0.42
PTCD3-217ENST00000488801 TRAV9-1A0A075B6T8 112 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 TRAV8-3A0A0A6YYJ7 113 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 I3L3M4 83 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 PPP1R17O96001 155 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 TSHBP01222 138 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 AMTP48728 403 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 RBX1P62877 108 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 RHEBQ15382 184 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 Q8N976 141 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 BTF3L4Q96K17 158 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 Q9HAA7 133 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
PTCD3-217ENST00000488801 A0A1B0GUV1 79 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 C7orf77A4D0Y5 90 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 SUMO2P61956 95 aaKnown RBP12.43□□□□□ -0.42
PTCD3-217ENST00000488801 RPL32P62910 135 aaKnown RBP12.43□□□□□ -0.42
PTCD3-217ENST00000488801 GAGE6Q13070 117 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 ELOBQ15370 118 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 CLRN3Q8NCR9 226 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 DEFB104AQ8WTQ1 72 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 PRR34Q9NV39 138 aa12.43□□□□□ -0.42
PTCD3-217ENST00000488801 LRCOL1A6NCL2 159 aa12.42□□□□□ -0.42
PTCD3-217ENST00000488801 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
PTCD3-217ENST00000488801 ESDP10768 282 aa12.42□□□□□ -0.42
PTCD3-217ENST00000488801 A0A087WTM6 91 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 D6R8Y8 96 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 PHOX2AO14813 284 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 APCSP02743 223 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 PPBPP02775 128 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 ENHOQ6UWT2 76 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 C20orf203Q8NBC4 194 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 C20orf78Q9BR46 151 aa12.41□□□□□ -0.42
PTCD3-217ENST00000488801 H7C423 109 aa12.4□□□□□ -0.42
PTCD3-217ENST00000488801 CKS2P33552 79 aa12.4□□□□□ -0.42
PTCD3-217ENST00000488801 LRP1BQ9NZR2 4599 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 NPYP01303 97 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
PTCD3-217ENST00000488801 PMCHP20382 165 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 Q0VG73 95 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 UBE2WQ96B02 151 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 TM2D2Q9BX73 214 aa12.39□□□□□ -0.43
PTCD3-217ENST00000488801 KRTAP10-2P60368 255 aa12.38□□□□□ -0.43
PTCD3-217ENST00000488801 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
PTCD3-217ENST00000488801 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
PTCD3-217ENST00000488801 VCYO14598 125 aa12.37□□□□□ -0.43
PTCD3-217ENST00000488801 MIAQ16674 131 aa12.37□□□□□ -0.43
PTCD3-217ENST00000488801 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
PTCD3-217ENST00000488801 COX11Q9Y6N1 276 aa12.37□□□□□ -0.43
PTCD3-217ENST00000488801 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
PTCD3-217ENST00000488801 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
PTCD3-217ENST00000488801 UBE2L6O14933 153 aa12.36□□□□□ -0.43
PTCD3-217ENST00000488801 KRTAP26-1Q6PEX3 210 aa12.36□□□□□ -0.43
PTCD3-217ENST00000488801 SPATA12Q7Z6I5 190 aa12.36□□□□□ -0.43
PTCD3-217ENST00000488801 RMI2Q96E14 147 aa12.36□□□□□ -0.43
PTCD3-217ENST00000488801 LAMTOR2Q9Y2Q5 125 aa12.36□□□□□ -0.43
PTCD3-217ENST00000488801 PRSS47A8MTI9 375 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 PSCAO43653 123 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 APOC3P02656 99 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 CRPP02741 224 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 WFDC2Q14508 124 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 MRPL52Q86TS9 123 aaKnown RBP12.35□□□□□ -0.43
PTCD3-217ENST00000488801 LINC00269Q8N2A0 174 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 SVBPQ8N300 66 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 PRELID3AQ96N28 172 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 RPS10P5Q9NQ39 176 aa12.35□□□□□ -0.43
PTCD3-217ENST00000488801 FGF6P10767 208 aa12.34□□□□□ -0.43
PTCD3-217ENST00000488801 ZNF25P17030 456 aaPredicted RBP12.34□□□□□ -0.43
PTCD3-217ENST00000488801 REG3AQ06141 175 aa12.34□□□□□ -0.43
PTCD3-217ENST00000488801 KIAA1109Q2LD37 5005 aa12.33□□□□□ -0.43
PTCD3-217ENST00000488801 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
PTCD3-217ENST00000488801 SNAPINO95295 136 aa12.33□□□□□ -0.44
PTCD3-217ENST00000488801 S100PP25815 95 aa12.33□□□□□ -0.44
PTCD3-217ENST00000488801 NDUFA5Q16718 116 aa12.33□□□□□ -0.44
PTCD3-217ENST00000488801 KIR2DL4Q99706 377 aa12.33□□□□□ -0.44
PTCD3-217ENST00000488801 C1orf43Q9BWL3 253 aa12.33□□□□□ -0.44
PTCD3-217ENST00000488801 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
PTCD3-217ENST00000488801 CLPSL2Q6UWE3 100 aa12.32□□□□□ -0.44
PTCD3-217ENST00000488801 EREGO14944 169 aa12.31□□□□□ -0.44
PTCD3-217ENST00000488801 TCAPO15273 167 aa12.31□□□□□ -0.44
PTCD3-217ENST00000488801 HLA-DQA1P01909 254 aa12.31□□□□□ -0.44
PTCD3-217ENST00000488801 Q8N814 137 aa12.31□□□□□ -0.44
PTCD3-217ENST00000488801 GNB1LQ9BYB4 327 aa12.31□□□□□ -0.44
PTCD3-217ENST00000488801 FCER1GP30273 86 aa12.3□□□□□ -0.44
PTCD3-217ENST00000488801 COX19Q49B96 90 aa12.3□□□□□ -0.44
PTCD3-217ENST00000488801 TRAV8-4A0A0B4J246 113 aa12.29□□□□□ -0.44
PTCD3-217ENST00000488801 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
PTCD3-217ENST00000488801 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
PTCD3-217ENST00000488801 CSDC2Q9Y534 153 aaKnown RBP12.29□□□□□ -0.44
PTCD3-217ENST00000488801 APOBP04114 4563 aaKnown RBP12.29□□□□□ -0.44
PTCD3-217ENST00000488801 C16orf90A8MZG2 172 aa12.28□□□□□ -0.44
PTCD3-217ENST00000488801 RNASEKQ6P5S7 137 aaKnown RBP12.28□□□□□ -0.44
PTCD3-217ENST00000488801 SLC7A5P1Q8MH63 180 aa12.28□□□□□ -0.44
PTCD3-217ENST00000488801 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
PTCD3-217ENST00000488801 YPEL4Q96NS1 127 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms