RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
UBAP2-211ENST00000488443 TRAV26-2A0A0B4J265 109 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 CACNG7P62955 275 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 CCL20P78556 96 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 LYZL1Q6UWQ5 148 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 STPG4Q8N801 248 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
UBAP2-211ENST00000488443 A0A1B0GUV1 79 aa8.37□□□□□ -1.07
UBAP2-211ENST00000488443 KANTRA0A1W2PQU2 76 aa8.37□□□□□ -1.07
UBAP2-211ENST00000488443 UMAD1C9J7I0 102 aa8.37□□□□□ -1.07
UBAP2-211ENST00000488443 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
UBAP2-211ENST00000488443 RPS10P46783 165 aaKnown RBP8.37□□□□□ -1.07
UBAP2-211ENST00000488443 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
UBAP2-211ENST00000488443 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
UBAP2-211ENST00000488443 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
UBAP2-211ENST00000488443 NIT2Q9NQR4 276 aa8.37□□□□□ -1.07
UBAP2-211ENST00000488443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.36□□□□□ -1.07
UBAP2-211ENST00000488443 IGKV2-29A2NJV5 120 aaPredicted RBP8.36□□□□□ -1.07
UBAP2-211ENST00000488443 NDUFS6O75380 124 aaKnown RBP8.36□□□□□ -1.07
UBAP2-211ENST00000488443 IFNA1P01562 189 aa8.36□□□□□ -1.07
UBAP2-211ENST00000488443 NTF3P20783 257 aa8.36□□□□□ -1.07
UBAP2-211ENST00000488443 GNG4P50150 75 aa8.36□□□□□ -1.07
UBAP2-211ENST00000488443 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
UBAP2-211ENST00000488443 CFAP161Q6P656 301 aa8.36□□□□□ -1.07
UBAP2-211ENST00000488443 CHCHD10Q8WYQ3 142 aaPredicted RBP8.36□□□□□ -1.07
UBAP2-211ENST00000488443 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
UBAP2-211ENST00000488443 A0A096LNI7 61 aa8.35□□□□□ -1.07
UBAP2-211ENST00000488443 BCL2L11O43521 198 aa8.35□□□□□ -1.07
UBAP2-211ENST00000488443 TWIST1Q15672 202 aa8.35□□□□□ -1.07
UBAP2-211ENST00000488443 Q6ZNX1 250 aa8.35□□□□□ -1.07
UBAP2-211ENST00000488443 RPL39LQ96EH5 51 aaKnown RBP8.35□□□□□ -1.07
UBAP2-211ENST00000488443 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
UBAP2-211ENST00000488443 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
UBAP2-211ENST00000488443 XKRY2A2RUG3 117 aa8.34□□□□□ -1.07
UBAP2-211ENST00000488443 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
UBAP2-211ENST00000488443 C11orf52Q96A22 123 aa8.34□□□□□ -1.07
UBAP2-211ENST00000488443 F2Z2F3 143 aa8.33□□□□□ -1.08
UBAP2-211ENST00000488443 XCL1P47992 114 aa8.33□□□□□ -1.08
UBAP2-211ENST00000488443 ZNF345Q14585 488 aa8.33□□□□□ -1.08
UBAP2-211ENST00000488443 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
UBAP2-211ENST00000488443 TNXBP22105 4242 aa8.32□□□□□ -1.08
UBAP2-211ENST00000488443 APCSP02743 223 aa8.32□□□□□ -1.08
UBAP2-211ENST00000488443 RGS21Q2M5E4 152 aa8.32□□□□□ -1.08
UBAP2-211ENST00000488443 LINC01600Q96MT4 127 aa8.32□□□□□ -1.08
UBAP2-211ENST00000488443 MED9Q9NWA0 146 aa8.32□□□□□ -1.08
UBAP2-211ENST00000488443 FGF6P10767 208 aa8.31□□□□□ -1.08
UBAP2-211ENST00000488443 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
UBAP2-211ENST00000488443 TRBV20OR9-2A0A075B6H5 130 aa8.3□□□□□ -1.08
UBAP2-211ENST00000488443 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
UBAP2-211ENST00000488443 FOXI1Q12951 378 aa8.3□□□□□ -1.08
UBAP2-211ENST00000488443 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
UBAP2-211ENST00000488443 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
UBAP2-211ENST00000488443 RNASE7Q9H1E1 156 aaKnown RBP8.3□□□□□ -1.08
UBAP2-211ENST00000488443 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
UBAP2-211ENST00000488443 CCL25O15444 150 aa8.29□□□□□ -1.08
UBAP2-211ENST00000488443 CTRLP40313 264 aa8.29□□□□□ -1.08
UBAP2-211ENST00000488443 MEF2BQ02080 365 aaPredicted RBP8.29□□□□□ -1.08
UBAP2-211ENST00000488443 CARD19Q96LW7 228 aa8.29□□□□□ -1.08
UBAP2-211ENST00000488443 A0A0J9YXV3 536 aa8.28□□□□□ -1.08
UBAP2-211ENST00000488443 HMSDA8MTL9 139 aa8.28□□□□□ -1.08
UBAP2-211ENST00000488443 TEX46H3BTG2 121 aa8.28□□□□□ -1.08
UBAP2-211ENST00000488443 PMCHP20382 165 aa8.28□□□□□ -1.08
UBAP2-211ENST00000488443 LRP2P98164 4655 aa8.28□□□□□ -1.08
UBAP2-211ENST00000488443 REG3GQ6UW15 175 aa8.28□□□□□ -1.08
UBAP2-211ENST00000488443 RPP21Q9H633 154 aaKnown RBP8.28□□□□□ -1.08
UBAP2-211ENST00000488443 SDHAF1A6NFY7 115 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 PDE6DO43924 150 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 GAGE2BQ13066 116 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 SMIM15Q7Z3B0 74 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 BTF3L4Q96K17 158 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
UBAP2-211ENST00000488443 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
UBAP2-211ENST00000488443 SPINK6Q6UWN8 80 aa8.26□□□□□ -1.09
UBAP2-211ENST00000488443 OR5A1Q8NGJ0 315 aa8.26□□□□□ -1.09
UBAP2-211ENST00000488443 SMIM12Q96EX1 92 aa8.26□□□□□ -1.09
UBAP2-211ENST00000488443 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
UBAP2-211ENST00000488443 TRAV1-1A0A0B4J248 108 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 IGHV1-58A0A0C4DH39 117 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 ZNF561-AS1K7EIQ3 104 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 K7EN84 100 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 GAS8-AS1O95177 125 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 NCR2O95944 276 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 BCL2P10415 239 aa8.25□□□□□ -1.09
UBAP2-211ENST00000488443 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
UBAP2-211ENST00000488443 SYCNQ0VAF6 134 aa8.24□□□□□ -1.09
UBAP2-211ENST00000488443 Q6ZRP5 223 aa8.24□□□□□ -1.09
UBAP2-211ENST00000488443 OCC1Q8TAD7 63 aa8.24□□□□□ -1.09
UBAP2-211ENST00000488443 LINC00474Q9P2X8 69 aa8.24□□□□□ -1.09
UBAP2-211ENST00000488443 RNF213Q63HN8 5207 aa8.23□□□□□ -1.09
UBAP2-211ENST00000488443 FAM231BA6NCW3 169 aa8.23□□□□□ -1.09
UBAP2-211ENST00000488443 H7C423 109 aa8.23□□□□□ -1.09
UBAP2-211ENST00000488443 I3L3M4 83 aa8.23□□□□□ -1.09
UBAP2-211ENST00000488443 CEBPGP53567 150 aa8.23□□□□□ -1.09
UBAP2-211ENST00000488443 SS18Q15532 418 aa8.23□□□□□ -1.09
UBAP2-211ENST00000488443 RNASE13Q5GAN3 156 aaKnown RBP8.23□□□□□ -1.09
UBAP2-211ENST00000488443 GATCO43716 136 aaKnown RBP8.22□□□□□ -1.09
UBAP2-211ENST00000488443 TSHBP01222 138 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms