RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SDHAF1A6NFY7 115 aa9.09□□□□□ -0.95
NELFE-209ENST00000488426 SYS1-DBNDD2H3BUS1 97 aa9.09□□□□□ -0.95
NELFE-209ENST00000488426 X6R8D5 127 aa9.09□□□□□ -0.95
NELFE-209ENST00000488426 A8MZ25 164 aa9.08□□□□□ -0.96
NELFE-209ENST00000488426 SPATA45Q537H7 98 aa9.08□□□□□ -0.96
NELFE-209ENST00000488426 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
NELFE-209ENST00000488426 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
NELFE-209ENST00000488426 SPATA12Q7Z6I5 190 aa9.08□□□□□ -0.96
NELFE-209ENST00000488426 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
NELFE-209ENST00000488426 NUDT3O95989 172 aa9.07□□□□□ -0.96
NELFE-209ENST00000488426 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
NELFE-209ENST00000488426 Q6ZN92 141 aa9.07□□□□□ -0.96
NELFE-209ENST00000488426 Q6ZVH6 145 aa9.07□□□□□ -0.96
NELFE-209ENST00000488426 LINC01549A6NIU2 74 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 CSMD3Q7Z407 3707 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 TRGV2A0A075B6R0 118 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 GAGE12BA1L429 117 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 ATP5LO75964 103 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 GAGE7O76087 117 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 GAGE12FP0CL80 117 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 GAGE12GP0CL81 117 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 GAGE12IP0CL82 117 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 Q6ZSN1 163 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 ZNF479Q96JC4 524 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 TNFRSF18Q9Y5U5 241 aa9.06□□□□□ -0.96
NELFE-209ENST00000488426 I3L3M4 83 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 RHOHQ15669 191 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 OR11H2Q8NH07 326 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 RNF183Q96D59 192 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 C18orf15Q96N68 181 aa9.05□□□□□ -0.96
NELFE-209ENST00000488426 TRBV10-1A0A0K0K1A3 114 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
NELFE-209ENST00000488426 P0DMU3 169 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 MIFP14174 115 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 WWC2-AS2Q96NR7 200 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 HINT1P49773 126 aaPredicted RBP9.04□□□□□ -0.96
NELFE-209ENST00000488426 EMP1P54849 157 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
NELFE-209ENST00000488426 STARD9Q9P2P6 4700 aa9.03□□□□□ -0.96
NELFE-209ENST00000488426 K7EQD1 137 aa9.03□□□□□ -0.96
NELFE-209ENST00000488426 VAMP3Q15836 100 aa9.03□□□□□ -0.96
NELFE-209ENST00000488426 LGALS9CQ6DKI2 356 aa9.03□□□□□ -0.96
NELFE-209ENST00000488426 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
NELFE-209ENST00000488426 CYSLTR1Q9Y271 337 aa9.03□□□□□ -0.96
NELFE-209ENST00000488426 TAX1BP3O14907 124 aa9.02□□□□□ -0.96
NELFE-209ENST00000488426 TSHBP01222 138 aa9.02□□□□□ -0.96
NELFE-209ENST00000488426 TP53TG1Q9Y2A0 90 aa9.02□□□□□ -0.96
NELFE-209ENST00000488426 IGHV4-28A0A0C4DH34 117 aa9.02□□□□□ -0.97
NELFE-209ENST00000488426 H0Y8G0 127 aa9.02□□□□□ -0.97
NELFE-209ENST00000488426 Q8NAQ8 132 aa9.02□□□□□ -0.97
NELFE-209ENST00000488426 SCGB3A1Q96QR1 104 aa9.02□□□□□ -0.97
NELFE-209ENST00000488426 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
NELFE-209ENST00000488426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.01□□□□□ -0.97
NELFE-209ENST00000488426 RPL36AP83881 106 aaKnown RBP9.01□□□□□ -0.97
NELFE-209ENST00000488426 ERASQ7Z444 233 aa9.01□□□□□ -0.97
NELFE-209ENST00000488426 RPL36ALQ969Q0 106 aaKnown RBP9.01□□□□□ -0.97
NELFE-209ENST00000488426 TRBV7-3A0A075B6L6 115 aa9□□□□□ -0.97
NELFE-209ENST00000488426 TRGV4A0A0C4DH28 118 aa9□□□□□ -0.97
NELFE-209ENST00000488426 SLC25A29Q8N8R3 303 aa9□□□□□ -0.97
NELFE-209ENST00000488426 Q9UF83 564 aa9□□□□□ -0.97
NELFE-209ENST00000488426 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
NELFE-209ENST00000488426 PRSS1P07477 247 aa9□□□□□ -0.97
NELFE-209ENST00000488426 DEFB130BP0DP73 79 aa9□□□□□ -0.97
NELFE-209ENST00000488426 DEFB130AP0DP74 79 aa9□□□□□ -0.97
NELFE-209ENST00000488426 FAM222AQ5U5X8 452 aa9□□□□□ -0.97
NELFE-209ENST00000488426 ATOH7Q8N100 152 aa9□□□□□ -0.97
NELFE-209ENST00000488426 DKK2Q9UBU2 259 aa9□□□□□ -0.97
NELFE-209ENST00000488426 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
NELFE-209ENST00000488426 FHL2Q14192 279 aa8.99□□□□□ -0.97
NELFE-209ENST00000488426 C20orf203Q8NBC4 194 aa8.99□□□□□ -0.97
NELFE-209ENST00000488426 TIMM17AQ99595 171 aa8.99□□□□□ -0.97
NELFE-209ENST00000488426 TM2D3Q9BRN9 247 aa8.99□□□□□ -0.97
NELFE-209ENST00000488426 ZMAT4Q9H898 229 aa8.99□□□□□ -0.97
NELFE-209ENST00000488426 DAZ4Q86SG3 579 aaKnown RBP8.98□□□□□ -0.97
NELFE-209ENST00000488426 ZNRF2Q8NHG8 242 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 TMEM141Q96I45 108 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 DAZ3Q9NR90 486 aaKnown RBP8.98□□□□□ -0.97
NELFE-209ENST00000488426 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
NELFE-209ENST00000488426 TRAV12-1A0A0B4J245 112 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 ODF1Q14990 250 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 LYSTQ99698 3801 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
NELFE-209ENST00000488426 TEX48A0A1B0GUV7 120 aa8.97□□□□□ -0.97
NELFE-209ENST00000488426 A0A1B0GV72 72 aa8.97□□□□□ -0.97
NELFE-209ENST00000488426 IGIPA6NJ69 53 aa8.97□□□□□ -0.97
NELFE-209ENST00000488426 UBE2D3P61077 147 aa8.97□□□□□ -0.97
NELFE-209ENST00000488426 UBE2D2P62837 147 aa8.97□□□□□ -0.97
NELFE-209ENST00000488426 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
NELFE-209ENST00000488426 DEFB104AQ8WTQ1 72 aa8.97□□□□□ -0.97
NELFE-209ENST00000488426 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms