RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TVP23BQ9NYZ1 205 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ABRACLQ9P1F3 81 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 NAT8BQ9UHF3 227 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ERG28Q9UKR5 140 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PAIP2BQ9ULR5 123 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PYCARDQ9ULZ3 195 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LAMTOR2Q9Y2Q5 125 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAM32AQ9Y421 112 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 LSM5Q9Y4Y9 91 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ATP6V1DQ9Y5K8 247 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 U3KQ87 197 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 V9GYS6 101 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 V9GYY5 206 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 HERC2O95714 4834 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 KDM5AP29375 1690 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PREX1Q8TCU6 1659 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CTTNBP2Q8WZ74 1663 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ALS2Q96Q42 1657 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 QRICH2Q9H0J4 1663 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RNF213Q63HN8 5207 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 PLXNA4Q9HCM2 1894 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 MYO18AQ92614 2054 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 WNK2Q9Y3S1 2297 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 FAT2Q9NYQ8 4349 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 DNAH9Q9NYC9 4486 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 RAPGEF6Q8TEU7 1601 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 EPPK1P58107 5090 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 VIRMAQ69YN4 1812 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 TAF1LQ8IZX4 1826 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 UBR4Q5T4S7 5183 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 ANK3Q12955 4377 aaKnown RBP-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CASZ1Q86V15 1759 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 IQGAP2Q13576 1575 aa-0.06□□□□□ -2.42
SMC4-219ENST00000487747 CSMD3Q7Z407 3707 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DNAH8Q96JB1 4490 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PLXND1Q9Y4D7 1925 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 COL12A1Q99715 3063 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PKHD1L1Q86WI1 4243 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 LRRC37A2A6NM11 1700 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 LY75O60449 1722 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 QSER1Q2KHR3 1735 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 KNDC1Q76NI1 1749 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 KIAA1551Q9HCM1 1747 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CUBNO60494 3623 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 STARD9Q9P2P6 4700 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 SVEP1Q4LDE5 3571 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 BIRC6Q9NR09 4857 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CROCC2H7BZ55 1655 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 IQGAP1P46940 1657 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CLTCQ00610 1675 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PLCH1Q4KWH8 1693 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 ADGBQ8N7X0 1667 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CFAP43Q8NDM7 1665 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 DNAH5Q8TE73 4624 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 MAP2P11137 1827 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 AFDNP55196 1824 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 ZNF236Q9UL36 1845 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TRAV12-2A0A075B6T6 113 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TRAV30A0A087WSZ9 112 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 FXYD6-FXYD2A0A087WZ82 144 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 A0A096LPF7 62 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TRBV7-1A0A0A6YYK4 115 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 BORCS7-ASMTA0A0B4J1R7 106 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TRAV13-2A0A0B4J235 113 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TRAV13-1A0A0B4J241 112 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TRAV22A0A0B4J277 110 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 IGHV1-24A0A0C4DH33 117 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 IGHV1-58A0A0C4DH39 117 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 A0A0D9SFI3 127 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 NBDYA0A0U1RRE5 68 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 MYMXA0A1B0GTQ4 84 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PNMA8CA0A1B0GUJ8 204 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 EXOC1LA0A1B0GW35 172 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 hADV38S2A0JD32 116 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 TMEM30CPA0ZSE6 113 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 C20orf202A1L168 122 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 C7orf77A4D0Y5 90 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 NAP1L6A6NFF2 107 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CCDC160A6NGH7 325 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 OR4C46A6NHA9 309 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 CRYM-AS1A6NIL9 109 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 SMIM23A6NLE4 172 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 A8MT66 165 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 LINC00587B1AMM8 73 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 HCG22E2RYF7 251 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 E7EQ34 232 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 PPP5D1E7EU14 171 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 F2Z2F3 143 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 F8VRH5 84 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 F8W1H4 67 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 G3V2T6 193 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 G3V318 75 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 H0YGX0 51 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 SYS1-DBNDD2H3BUS1 97 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 GABARAPH6UMI1 98 aa-0.07□□□□□ -2.42
SMC4-219ENST00000487747 J3QRK9 145 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms