RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 NAT8BQ9UHF3 227 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 UFC1Q9Y3C8 167 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 FAM215AQ9Y5M1 114 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 V9GYV3 84 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 NAV3Q8IVL0 2385 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 TNCP24821 2201 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 EP300Q09472 2414 aaPredicted RBP1.6□□□□□ -2.15
TTC3-220ENST00000487711 VPS13AQ96RL7 3174 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 MAST4O15021 2626 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 POLEQ07864 2286 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 CFAP54Q96N23 3096 aa1.6□□□□□ -2.15
TTC3-220ENST00000487711 PTPRZ1P23471 2315 aaPredicted RBP1.6□□□□□ -2.15
TTC3-220ENST00000487711 MUC6Q6W4X9 2439 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 CADP27708 2225 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 SORL1Q92673 2214 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 MUC3AQ02505 3323 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 CACNA1BQ00975 2339 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 ACACAQ13085 2346 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 TMEM189A5PLL7 270 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 LINC01549A6NIU2 74 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 GGTLC3B5MD39 225 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 M0R1W7 72 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 NDUFB3O43676 98 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 GPX1P07203 203 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 SAA1P0DJI8 122 aaPredicted RBP1.59□□□□□ -2.15
TTC3-220ENST00000487711 ATP5G3P48201 142 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 EDDM3BP56851 147 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 UBE2G1P62253 170 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 UBE2L3P68036 154 aaKnown RBP1.59□□□□□ -2.15
TTC3-220ENST00000487711 ZNF90Q03938 601 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 PLGLAQ15195 96 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 KRTAP25-1Q3LHN0 102 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 TMEM155Q4W5P6 130 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 OCIAD2Q56VL3 154 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 COL5A1-AS1Q5SY13 56 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 C10orf113Q5VZT2 155 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 MIC13Q5XKP0 118 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 ZNF826PQ6ZT77 177 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 SPATA12Q7Z6I5 190 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 SMIM20Q8N5G0 67 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 OR11H6Q8NGC7 330 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 TSKUQ8WUA8 353 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 FAM167A-AS1Q96KT0 104 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 MIEN1Q9BRT3 115 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 VAMP8Q9BV40 100 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 TMEM133Q9H2Q1 129 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 OTORQ9NRC9 128 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 UQCR10Q9UDW1 63 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 LAMTOR2Q9Y2Q5 125 aa1.59□□□□□ -2.15
TTC3-220ENST00000487711 RIF1Q5UIP0 2472 aaKnown RBP1.59□□□□□ -2.16
TTC3-220ENST00000487711 ZNF462Q96JM2 2506 aa1.59□□□□□ -2.16
TTC3-220ENST00000487711 DIDO1Q9BTC0 2240 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 IGLC7A0M8Q6 106 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 GRIFINA4D1Z8 144 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 RBAKDNA6NC62 111 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 C19orf71A6NCJ1 209 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 K7EMI3 77 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 HYPMO75409 117 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 NDUFA3O95167 84 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 SLC25A5P05141 298 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 HLA-DRB4P13762 266 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 EVI2AP22794 236 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 RPL27AP46776 148 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 HBBP68871 147 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 RHOGP84095 191 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 PSG9Q00887 426 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 LTC4SQ16873 150 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 RPL39P5Q59GN2 51 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 MINOS1Q5TGZ0 78 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 MRPL54Q6P161 138 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 AMTNQ6UX39 209 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 GOLT1AQ6ZVE7 132 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 BAGE3Q86Y29 109 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 BAGE2Q86Y30 109 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 BPIFA4PQ86YQ2 179 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 ANKRD29Q8N6D5 301 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 DAND5Q8N907 189 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 OR5A1Q8NGJ0 315 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 PMCHL2Q9BQD1 86 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 TMEM70Q9BUB7 260 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 SPANXDQ9BXN6 97 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 CNFNQ9BYD5 112 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 CST9LQ9H4G1 147 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 ST20Q9HBF5 79 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 MRPL16Q9NX20 251 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 LENEPQ9Y5L5 61 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 MINOS1-NBL1R4GNA1 71 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 HLA-DRB4X5D2U9 266 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 CHD8Q9HCK8 2581 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 TPRP12270 2363 aaKnown RBP1.58□□□□□ -2.16
TTC3-220ENST00000487711 ARFGEF3Q5TH69 2177 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 MALRD1Q5VYJ5 2156 aa1.58□□□□□ -2.16
TTC3-220ENST00000487711 DSPP15924 2871 aaKnown RBP1.57□□□□□ -2.16
TTC3-220ENST00000487711 APC2O95996 2303 aa1.57□□□□□ -2.16
TTC3-220ENST00000487711 PTPRQQ9UMZ3 2332 aa1.57□□□□□ -2.16
TTC3-220ENST00000487711 TRAV3A0A0B4J244 114 aa1.57□□□□□ -2.16
TTC3-220ENST00000487711 C7orf71A4D174 169 aa1.57□□□□□ -2.16
TTC3-220ENST00000487711 DPRXA6NFQ7 191 aa1.57□□□□□ -2.16
TTC3-220ENST00000487711 LINC01546A6NGU7 62 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms