RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
SREBF1-215ENST00000487401 TRBV25-1A0A075B6N4 114 aa8.14□□□□□ -1.11
SREBF1-215ENST00000487401 PDE6DO43924 150 aa8.14□□□□□ -1.11
SREBF1-215ENST00000487401 P01737 135 aa8.14□□□□□ -1.11
SREBF1-215ENST00000487401 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
SREBF1-215ENST00000487401 CHAC1Q9BUX1 264 aa8.14□□□□□ -1.11
SREBF1-215ENST00000487401 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
SREBF1-215ENST00000487401 IGHV1-24A0A0C4DH33 117 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 ZNF727A8MUV8 499 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 F2Z2F3 143 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 S100A6P06703 90 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 IGLC6P0CF74 106 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 CEBPGP53567 150 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 RBX1P62877 108 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
SREBF1-215ENST00000487401 MIAQ16674 131 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 NTM-AS1Q6ZSK4 140 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 SCXQ7RTU7 201 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 SMIM12Q96EX1 92 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 CTDSP1Q9GZU7 261 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 TMEM242Q9NWH2 141 aa8.13□□□□□ -1.11
SREBF1-215ENST00000487401 C19orf71A6NCJ1 209 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 TMEM250H0YL14 139 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 M0QY20 66 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 HLA-DQA1P01909 254 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 S100A8P05109 93 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 SUMO4Q6EEV6 95 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
SREBF1-215ENST00000487401 TRGC1P0CF51 173 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 DEFB104AQ8WTQ1 72 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 C12orf57Q99622 126 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 NAT8Q9UHE5 227 aa8.11□□□□□ -1.11
SREBF1-215ENST00000487401 RPS10P46783 165 aaKnown RBP8.1□□□□□ -1.11
SREBF1-215ENST00000487401 S100A12P80511 92 aa8.1□□□□□ -1.11
SREBF1-215ENST00000487401 TMEM241Q24JQ0 296 aa8.1□□□□□ -1.11
SREBF1-215ENST00000487401 RASL11AQ6T310 242 aa8.1□□□□□ -1.11
SREBF1-215ENST00000487401 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
SREBF1-215ENST00000487401 PRR34Q9NV39 138 aa8.1□□□□□ -1.11
SREBF1-215ENST00000487401 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 NTF3P20783 257 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 FABP9Q0Z7S8 132 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 WDR73Q6P4I2 378 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 TMEM243Q9BU79 118 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
SREBF1-215ENST00000487401 TRBV24-1A0A075B6N3 115 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 TGIF2-C20orf24A0A0A6YYL0 155 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 PRSS1P07477 247 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 REG3AQ06141 175 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 TWIST1Q15672 202 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 SMIM7Q9BQ49 75 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 NIT2Q9NQR4 276 aa8.08□□□□□ -1.12
SREBF1-215ENST00000487401 TRBV20OR9-2A0A075B6H5 130 aa8.07□□□□□ -1.12
SREBF1-215ENST00000487401 UBE2L6O14933 153 aa8.07□□□□□ -1.12
SREBF1-215ENST00000487401 RPL23P62829 140 aaKnown RBP8.07□□□□□ -1.12
SREBF1-215ENST00000487401 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
SREBF1-215ENST00000487401 IGLV10-54A0A075B6I4 117 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 TRAV8-4A0A0B4J246 113 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 A0A1B0GUV1 79 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
SREBF1-215ENST00000487401 AMTP48728 403 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 COTL1Q14019 142 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 SMIM15Q7Z3B0 74 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
SREBF1-215ENST00000487401 RPP21Q9H633 154 aaKnown RBP8.06□□□□□ -1.12
SREBF1-215ENST00000487401 PCP4L1A6NKN8 68 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 CTRLP40313 264 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 NDUFA6P56556 154 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 ADIRFQ15847 76 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 C9orf163Q8N9P6 203 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 C20orf203Q8NBC4 194 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 OCC1Q8TAD7 63 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 ANAPC16Q96DE5 110 aa8.05□□□□□ -1.12
SREBF1-215ENST00000487401 RNASE7Q9H1E1 156 aaKnown RBP8.05□□□□□ -1.12
SREBF1-215ENST00000487401 IGLV4-60A0A075B6I1 120 aa8.04□□□□□ -1.12
SREBF1-215ENST00000487401 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
SREBF1-215ENST00000487401 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
SREBF1-215ENST00000487401 K7EN84 100 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 PHOX2AO14813 284 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 TRGC2P03986 189 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 S100PP25815 95 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
SREBF1-215ENST00000487401 GATD1Q8NB37 220 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
SREBF1-215ENST00000487401 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms