RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 ZNF479Q96JC4 524 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 AMELXQ99217 191 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 MRPL16Q9NX20 251 aaKnown RBP12.28□□□□□ -0.44
FDPS-212ENST00000487002 J3QQQ9 107 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 LEPROTO15243 131 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 SPANXA1Q9NS26 97 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 XCL2Q9UBD3 114 aa12.28□□□□□ -0.44
FDPS-212ENST00000487002 TENM4Q6N022 2769 aa12.27□□□□□ -0.44
FDPS-212ENST00000487002 ZNF22P17026 224 aaPredicted RBP12.27□□□□□ -0.44
FDPS-212ENST00000487002 LGALS3P17931 250 aaKnown RBP12.27□□□□□ -0.44
FDPS-212ENST00000487002 Q6ZSN1 163 aa12.27□□□□□ -0.44
FDPS-212ENST00000487002 C1orf158Q8N1D5 194 aa12.27□□□□□ -0.44
FDPS-212ENST00000487002 FAM110AQ9BQ89 295 aa12.27□□□□□ -0.44
FDPS-212ENST00000487002 SRSF9Q13242 221 aaKnown RBP eCLIP12.27□□□□□ -0.45
FDPS-212ENST00000487002 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
FDPS-212ENST00000487002 SONP18583 2426 aaKnown RBP12.27□□□□□ -0.45
FDPS-212ENST00000487002 K7ERU9 68 aa12.26□□□□□ -0.45
FDPS-212ENST00000487002 ZNF418Q8TF45 676 aaPredicted RBP12.26□□□□□ -0.45
FDPS-212ENST00000487002 CHCHD7Q9BUK0 85 aa12.26□□□□□ -0.45
FDPS-212ENST00000487002 UBE2D1P51668 147 aa12.25□□□□□ -0.45
FDPS-212ENST00000487002 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
FDPS-212ENST00000487002 PDZD2O15018 2839 aa12.25□□□□□ -0.45
FDPS-212ENST00000487002 HILS1P60008 231 aa12.25□□□□□ -0.45
FDPS-212ENST00000487002 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
FDPS-212ENST00000487002 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
FDPS-212ENST00000487002 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
FDPS-212ENST00000487002 NDUFA7O95182 113 aa12.24□□□□□ -0.45
FDPS-212ENST00000487002 AZU1P20160 251 aa12.24□□□□□ -0.45
FDPS-212ENST00000487002 TMEM263Q8WUH6 116 aaKnown RBP12.24□□□□□ -0.45
FDPS-212ENST00000487002 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
FDPS-212ENST00000487002 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
FDPS-212ENST00000487002 COTL1Q14019 142 aa12.23□□□□□ -0.45
FDPS-212ENST00000487002 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
FDPS-212ENST00000487002 SAP30O75446 220 aa12.22□□□□□ -0.45
FDPS-212ENST00000487002 ANK3Q12955 4377 aaKnown RBP12.22□□□□□ -0.45
FDPS-212ENST00000487002 IGHV3-30P01768 117 aa12.21□□□□□ -0.45
FDPS-212ENST00000487002 IGHV3-30-5P0DP03 117 aa12.21□□□□□ -0.45
FDPS-212ENST00000487002 Q9UF83 564 aa12.21□□□□□ -0.45
FDPS-212ENST00000487002 HELZ2Q9BYK8 2649 aaKnown RBP12.21□□□□□ -0.45
FDPS-212ENST00000487002 TRGV1A0A0A0MS02 117 aa12.2□□□□□ -0.46
FDPS-212ENST00000487002 TRBV10-1A0A0K0K1A3 114 aa12.2□□□□□ -0.46
FDPS-212ENST00000487002 TINCRA0A1B0GVN0 87 aa12.2□□□□□ -0.46
FDPS-212ENST00000487002 TIMM21Q9BVV7 248 aa12.2□□□□□ -0.46
FDPS-212ENST00000487002 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
FDPS-212ENST00000487002 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
FDPS-212ENST00000487002 ADARB2-AS1A8MUL3 147 aa12.19□□□□□ -0.46
FDPS-212ENST00000487002 PGPEP1Q9NXJ5 209 aa12.19□□□□□ -0.46
FDPS-212ENST00000487002 CEMP1Q6PRD7 247 aaPredicted RBP12.18□□□□□ -0.46
FDPS-212ENST00000487002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
FDPS-212ENST00000487002 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
FDPS-212ENST00000487002 F8W1H4 67 aa12.18□□□□□ -0.46
FDPS-212ENST00000487002 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
FDPS-212ENST00000487002 C1QTNF4Q9BXJ3 329 aa12.18□□□□□ -0.46
FDPS-212ENST00000487002 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
FDPS-212ENST00000487002 TMEM238C9JI98 176 aa12.17□□□□□ -0.46
FDPS-212ENST00000487002 K7EQD1 137 aa12.17□□□□□ -0.46
FDPS-212ENST00000487002 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
FDPS-212ENST00000487002 C16orf74Q96GX8 76 aa12.17□□□□□ -0.46
FDPS-212ENST00000487002 C19orf73Q9NVV2 129 aa12.17□□□□□ -0.46
FDPS-212ENST00000487002 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
FDPS-212ENST00000487002 GIG44P09565 113 aaPredicted RBP12.16□□□□□ -0.46
FDPS-212ENST00000487002 IGHV3-30-3P0DP02 117 aa12.16□□□□□ -0.46
FDPS-212ENST00000487002 Q6ZUT4 128 aa12.16□□□□□ -0.46
FDPS-212ENST00000487002 NDUFA11Q86Y39 141 aa12.16□□□□□ -0.46
FDPS-212ENST00000487002 IGHV3-38A0A0C4DH36 116 aa12.16□□□□□ -0.46
FDPS-212ENST00000487002 RPL36AP83881 106 aaKnown RBP12.16□□□□□ -0.46
FDPS-212ENST00000487002 LYRM7Q5U5X0 104 aa12.16□□□□□ -0.46
FDPS-212ENST00000487002 RPL36ALQ969Q0 106 aaKnown RBP12.16□□□□□ -0.46
FDPS-212ENST00000487002 CIDEAO60543 219 aa12.15□□□□□ -0.46
FDPS-212ENST00000487002 Q6ZTI0 123 aa12.15□□□□□ -0.46
FDPS-212ENST00000487002 DAZ4Q86SG3 579 aaKnown RBP12.15□□□□□ -0.46
FDPS-212ENST00000487002 DAZ3Q9NR90 486 aaKnown RBP12.15□□□□□ -0.46
FDPS-212ENST00000487002 IGHV3-64A0A075B6Q5 118 aa12.15□□□□□ -0.47
FDPS-212ENST00000487002 TSPAN13O95857 204 aa12.15□□□□□ -0.47
FDPS-212ENST00000487002 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.47
FDPS-212ENST00000487002 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 APOMO95445 188 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 TIRAPP58753 221 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 SMAGPQ0VAQ4 97 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
FDPS-212ENST00000487002 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 VPS25Q9BRG1 176 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 NF1P21359 2839 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 IGLV5-45A0A087WSX0 123 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 G3V4G9 280 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 H3BMG7 143 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 CFC1BP0CG36 223 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 CFC1P0CG37 223 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 UBE2D3P61077 147 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 UBE2D2P62837 147 aa12.13□□□□□ -0.47
FDPS-212ENST00000487002 RPL24P83731 157 aaKnown RBP12.13□□□□□ -0.47
FDPS-212ENST00000487002 CSDC2Q9Y534 153 aaKnown RBP12.13□□□□□ -0.47
FDPS-212ENST00000487002 PLAC8L1A1L4L8 177 aa12.12□□□□□ -0.47
FDPS-212ENST00000487002 CSNK1G2-AS1Q8NCQ2 148 aa12.12□□□□□ -0.47
FDPS-212ENST00000487002 GEMIN7Q9H840 131 aaKnown RBP12.12□□□□□ -0.47
FDPS-212ENST00000487002 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
FDPS-212ENST00000487002 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
FDPS-212ENST00000487002 CUBNO60494 3623 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms