RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
CHMP3-208ENST00000486404 FRZBQ92765 325 aa8.51□□□□□ -1.05
CHMP3-208ENST00000486404 HIGD1CA8MV81 97 aa8.5□□□□□ -1.05
CHMP3-208ENST00000486404 HAMPP81172 84 aa8.5□□□□□ -1.05
CHMP3-208ENST00000486404 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
CHMP3-208ENST00000486404 LINC00269Q8N2A0 174 aa8.5□□□□□ -1.05
CHMP3-208ENST00000486404 TSKUQ8WUA8 353 aa8.5□□□□□ -1.05
CHMP3-208ENST00000486404 OSTCQ9NRP0 149 aa8.5□□□□□ -1.05
CHMP3-208ENST00000486404 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 XGP55808 180 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 ADIRFQ15847 76 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 Q5VSD8 79 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 GATD1Q8NB37 220 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 DEFB104AQ8WTQ1 72 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 RPL39LQ96EH5 51 aaKnown RBP8.49□□□□□ -1.05
CHMP3-208ENST00000486404 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
CHMP3-208ENST00000486404 APCSP02743 223 aa8.48□□□□□ -1.05
CHMP3-208ENST00000486404 REG3AQ06141 175 aa8.48□□□□□ -1.05
CHMP3-208ENST00000486404 PEA15Q15121 130 aa8.48□□□□□ -1.05
CHMP3-208ENST00000486404 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
CHMP3-208ENST00000486404 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
CHMP3-208ENST00000486404 IGLV10-54A0A075B6I4 117 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 FAM231BA6NCW3 169 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 USP17L23D6RBM5 183 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
CHMP3-208ENST00000486404 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 ISOC2Q96AB3 205 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 NAT8Q9UHE5 227 aa8.47□□□□□ -1.05
CHMP3-208ENST00000486404 SDHAF1A6NFY7 115 aa8.46□□□□□ -1.06
CHMP3-208ENST00000486404 NCR2O95944 276 aa8.46□□□□□ -1.06
CHMP3-208ENST00000486404 RIGQ13278 110 aa8.46□□□□□ -1.06
CHMP3-208ENST00000486404 A0A1B0GUV1 79 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 SMR3BP02814 79 aaPredicted RBP8.45□□□□□ -1.06
CHMP3-208ENST00000486404 RPL23P62829 140 aaKnown RBP8.45□□□□□ -1.06
CHMP3-208ENST00000486404 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 C20orf203Q8NBC4 194 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 TMEM191AQ9H0A3 160 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 ST20Q9HBF5 79 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 NAT8BQ9UHF3 227 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 V9GYV3 84 aa8.45□□□□□ -1.06
CHMP3-208ENST00000486404 IGLV4-60A0A075B6I1 120 aa8.44□□□□□ -1.06
CHMP3-208ENST00000486404 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
CHMP3-208ENST00000486404 PMCHP20382 165 aa8.44□□□□□ -1.06
CHMP3-208ENST00000486404 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
CHMP3-208ENST00000486404 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
CHMP3-208ENST00000486404 SMDT1Q9H4I9 107 aa8.44□□□□□ -1.06
CHMP3-208ENST00000486404 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
CHMP3-208ENST00000486404 IGKV3OR2-268A0A0C4DH90 116 aa8.43□□□□□ -1.06
CHMP3-208ENST00000486404 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
CHMP3-208ENST00000486404 C9JQL5 133 aa8.43□□□□□ -1.06
CHMP3-208ENST00000486404 I3L3M4 83 aa8.43□□□□□ -1.06
CHMP3-208ENST00000486404 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
CHMP3-208ENST00000486404 NUP35Q8NFH5 326 aa8.43□□□□□ -1.06
CHMP3-208ENST00000486404 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
CHMP3-208ENST00000486404 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
CHMP3-208ENST00000486404 SRSF3P84103 164 aaKnown RBP8.42□□□□□ -1.06
CHMP3-208ENST00000486404 Q6ZSA8 131 aa8.42□□□□□ -1.06
CHMP3-208ENST00000486404 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
CHMP3-208ENST00000486404 TMEM242Q9NWH2 141 aa8.42□□□□□ -1.06
CHMP3-208ENST00000486404 H7C423 109 aa8.41□□□□□ -1.06
CHMP3-208ENST00000486404 INAFM2P0DMQ5 153 aa8.41□□□□□ -1.06
CHMP3-208ENST00000486404 FGF6P10767 208 aa8.41□□□□□ -1.06
CHMP3-208ENST00000486404 RAB14P61106 215 aa8.41□□□□□ -1.06
CHMP3-208ENST00000486404 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
CHMP3-208ENST00000486404 hDV102S1A0JD36 115 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 PPP1R17O96001 155 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 PRSS1P07477 247 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.06
CHMP3-208ENST00000486404 RAB4AP20338 218 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 RPS10P46783 165 aaKnown RBP8.4□□□□□ -1.06
CHMP3-208ENST00000486404 CAMPP49913 170 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 CLRN3Q8NCR9 226 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 RNF185Q96GF1 192 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
CHMP3-208ENST00000486404 A0A1B0GW15 77 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 SMKR1H3BMG3 65 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 TSHBP01222 138 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 S100A8P05109 93 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 FCER1GP30273 86 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 KRTAP26-1Q6PEX3 210 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 SCXQ7RTU7 201 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 OR5A1Q8NGJ0 315 aa8.39□□□□□ -1.07
CHMP3-208ENST00000486404 C7orf77A4D0Y5 90 aa8.38□□□□□ -1.07
CHMP3-208ENST00000486404 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
CHMP3-208ENST00000486404 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
CHMP3-208ENST00000486404 DGAT2L7PQ6IED9 249 aa8.38□□□□□ -1.07
CHMP3-208ENST00000486404 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
CHMP3-208ENST00000486404 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
CHMP3-208ENST00000486404 PPP1R2P9O14990 202 aa8.37□□□□□ -1.07
CHMP3-208ENST00000486404 SUMO2P61956 95 aaKnown RBP8.37□□□□□ -1.07
CHMP3-208ENST00000486404 HBBP68871 147 aa8.37□□□□□ -1.07
CHMP3-208ENST00000486404 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
CHMP3-208ENST00000486404 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
CHMP3-208ENST00000486404 KIR2DL4Q99706 377 aa8.37□□□□□ -1.07
CHMP3-208ENST00000486404 CHAC1Q9BUX1 264 aa8.37□□□□□ -1.07
CHMP3-208ENST00000486404 F8W036 122 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms