RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, human

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC142-208	ENST00000486335	SMKR1	H3BMG3	65 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335		H7C1H1	209 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	NUPR1	O60356	82 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	NPY	P01303	97 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	LINC00614	P0C842	121 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	GATA1	P15976	413 aa	Predicted RBP	6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	CCL18	P55774	89 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	LINC00310	P59036	64 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	ESRG	Q1W209	222 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	SUMO4	Q6EEV6	95 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	NIT1	Q86X76	327 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	BAGE3	Q86Y29	109 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	OR4C5	Q8NGB2	326 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	CHCHD1	Q96BP2	118 aa	Known RBP	6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	URB1-AS1	Q96HZ7	61 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	PACRG	Q96M98	296 aa	Predicted RBP	6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	UPK3B	Q9BT76	320 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	TNFRSF18	Q9Y5U5	241 aa		6.28	□□□□□ -1.4
CCDC142-208	ENST00000486335	TRAV26-2	A0A0B4J265	109 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	LOC105371267	A0A1B0GV96	52 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	GAGE12B	A1L429	117 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335		F5H768	121 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	GAGE7	O76087	117 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	NCR2	O95944	276 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	MGP	P08493	103 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	GAGE12F	P0CL80	117 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	GAGE12G	P0CL81	117 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	GAGE12I	P0CL82	117 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	POLR2K	P53803	58 aa	Known RBP	6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	SUMO2	P61956	95 aa	Known RBP	6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	IQCJ	Q1A5X6	159 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	FAM74A4	Q5TZK3	123 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	HIST3H2BB	Q8N257	126 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	PRSS3P2	Q8NHM4	247 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	MAP1LC3A	Q9H492	121 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	NIT2	Q9NQR4	276 aa		6.27	□□□□□ -1.41
CCDC142-208	ENST00000486335	TRGV2	A0A075B6R0	118 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335		J3QL48	77 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335		K7EMI3	77 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	SERF1A	O75920	110 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	ATP5G1	P05496	136 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	PMCH	P20382	165 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	S100A2	P29034	98 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	IFI27	P40305	119 aa	Predicted RBP	6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	ZNF56	Q15929	161 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335		Q6ZSN1	163 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335		Q8N8P6	123 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	ZNF479	Q96JC4	524 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	DNAJC30	Q96LL9	226 aa		6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	NXT2	Q9NPJ8	142 aa	Known RBP	6.26	□□□□□ -1.41
CCDC142-208	ENST00000486335	TRBV10-1	A0A0K0K1A3	114 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	TRBV6-4	A0A1B0GX49	114 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	IFITM10	A6NMD0	228 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	VCY	O14598	125 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	FHL2	Q14192	279 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	RPL39L	Q96EH5	51 aa	Known RBP	6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	ST20	Q9HBF5	79 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	AP5S1	Q9NUS5	200 aa		6.25	□□□□□ -1.41
CCDC142-208	ENST00000486335	IGHV3-73	A0A0B4J1V6	119 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	TRBV27	A0A0K0K1C4	114 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	LOC389332	A0A1B0GUA5	103 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	DNAH10OS	P0CZ25	163 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	AKR1D1	P51857	326 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	FA2H	Q7L5A8	372 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	TMEM18	Q96B42	140 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	HIST1H2BL	Q99880	126 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	TMEM70	Q9BUB7	260 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	SMIM2	Q9BVW6	85 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335	RNF213	Q63HN8	5207 aa		6.24	□□□□□ -1.41
CCDC142-208	ENST00000486335		A0A087WTM6	91 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	SDHAF1	A6NFY7	115 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	HSBP1	O75506	76 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	SMIM6	P0DI80	62 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	TTC32	Q5I0X7	151 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	CDPF1	Q6NVV7	123 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	SLC25A29	Q8N8R3	303 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	FAM30A	Q9NZY2	134 aa		6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	MRPS16	Q9Y3D3	137 aa	Known RBP	6.23	□□□□□ -1.41
CCDC142-208	ENST00000486335	TRBV7-3	A0A075B6L6	115 aa		6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335	TRAV26-1	A0A087WT03	109 aa		6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335	TCAP	O15273	167 aa		6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335	RNASEK	Q6P5S7	137 aa	Known RBP	6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335	NEXN-AS1	Q8NBZ9	246 aa		6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335		Q9UF83	564 aa		6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335	HHLA3	Q9XRX5	114 aa		6.22	□□□□□ -1.41
CCDC142-208	ENST00000486335		A0A096LNJ9	63 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	TRGV4	A0A0C4DH28	118 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335		A0A0J9YY99	117 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335		I3L3M4	83 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335		K7EQD1	137 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	G0S2	P27469	103 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	FCER1G	P30273	86 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	AMT	P48728	403 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	CRYBA4	P53673	196 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	RPL36A	P83881	106 aa	Known RBP	6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	LAGE3	Q14657	143 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	RHOH	Q15669	191 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	ORMDL2	Q53FV1	153 aa		6.21	□□□□□ -1.42
CCDC142-208	ENST00000486335	PDZD11	Q5EBL8	140 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms