RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 PHF3Q92576 2039 aaKnown RBP6.63□□□□□ -1.35
GABRE-209ENST00000486255 IGHV4-30-4P0DP06 118 aa6.63□□□□□ -1.35
GABRE-209ENST00000486255 IGHV4-31P0DP07 118 aa6.63□□□□□ -1.35
GABRE-209ENST00000486255 DEFB1P60022 68 aa6.63□□□□□ -1.35
GABRE-209ENST00000486255 Q8N9W7 124 aa6.63□□□□□ -1.35
GABRE-209ENST00000486255 INTS1Q8N201 2190 aaKnown RBP6.63□□□□□ -1.35
GABRE-209ENST00000486255 TRBV10-1A0A0K0K1A3 114 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
GABRE-209ENST00000486255 CACNA1DQ01668 2161 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 PRORYQ9H606 182 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 EBI3Q14213 229 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 DCANP1Q8TF63 244 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
GABRE-209ENST00000486255 ZFP36P26651 326 aaKnown RBP6.62□□□□□ -1.35
GABRE-209ENST00000486255 FAM222AQ5U5X8 452 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 Q6Q795 121 aa6.62□□□□□ -1.35
GABRE-209ENST00000486255 EML6Q6ZMW3 1958 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 IGLV2-8P01709 118 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 Q6ZSR3 168 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 PRO0255Q9UI72 69 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 ZNF80P51504 273 aaPredicted RBP6.61□□□□□ -1.35
GABRE-209ENST00000486255 C22orf34Q6ZV56 151 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 ATG2AQ2TAZ0 1938 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 IGLV2-14P01704 120 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 DEFB135Q30KP9 77 aa6.61□□□□□ -1.35
GABRE-209ENST00000486255 KLK5Q9Y337 293 aaPredicted RBP6.61□□□□□ -1.35
GABRE-209ENST00000486255 FER1L5A0AVI2 2057 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 CACNA1BQ00975 2339 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 ZDBF2Q9HCK1 2354 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 A0A0J9YX75 114 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 FAM19A5Q7Z5A7 132 aaPredicted RBP6.6□□□□□ -1.35
GABRE-209ENST00000486255 C11orf1Q9H5F2 150 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 CDKN2A-AS1Q9UH64 79 aa6.6□□□□□ -1.35
GABRE-209ENST00000486255 A0A1W2PNU3 283 aaPredicted RBP6.59□□□□□ -1.35
GABRE-209ENST00000486255 LINC00322Q6ZN03 302 aaPredicted RBP6.59□□□□□ -1.35
GABRE-209ENST00000486255 U3KQK5 164 aa6.59□□□□□ -1.35
GABRE-209ENST00000486255 LST1O00453 97 aa6.59□□□□□ -1.35
GABRE-209ENST00000486255 A0A087WZ39 114 aa6.59□□□□□ -1.35
GABRE-209ENST00000486255 KIAA2026Q5HYC2 2103 aa6.59□□□□□ -1.35
GABRE-209ENST00000486255 ODF3L1Q8IXM7 274 aa6.59□□□□□ -1.35
GABRE-209ENST00000486255 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.36
GABRE-209ENST00000486255 C6orf99Q4VX62 202 aa6.59□□□□□ -1.36
GABRE-209ENST00000486255 MAP6D1Q9H9H5 199 aa6.59□□□□□ -1.36
GABRE-209ENST00000486255 FAM215AQ9Y5M1 114 aa6.59□□□□□ -1.36
GABRE-209ENST00000486255 E7EUB6 86 aa6.58□□□□□ -1.36
GABRE-209ENST00000486255 CSDC2Q9Y534 153 aaKnown RBP6.58□□□□□ -1.36
GABRE-209ENST00000486255 PRYO14603 147 aa6.58□□□□□ -1.36
GABRE-209ENST00000486255 C2orf91Q6ZV80 131 aa6.58□□□□□ -1.36
GABRE-209ENST00000486255 Q8N976 141 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 DHRS4-AS1Q9P1J3 65 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 CEP192Q8TEP8 1941 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 TMEM89A2RUT3 159 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 SMIM11BQ8TCY0 68 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 ODF3Q96PU9 254 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 CEP250Q9BV73 2442 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 COL5A1P20908 1838 aaPredicted RBP6.57□□□□□ -1.36
GABRE-209ENST00000486255 INSL3P51460 131 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 MYCNOSP40205 109 aa6.57□□□□□ -1.36
GABRE-209ENST00000486255 CRYGDP07320 174 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 NANOS2P60321 138 aaKnown RBP6.56□□□□□ -1.36
GABRE-209ENST00000486255 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 PSPHP1O15172 72 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 RNF185Q96GF1 192 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 UBE2D2P62837 147 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 Q6ZTI0 123 aa6.56□□□□□ -1.36
GABRE-209ENST00000486255 IGHV4-61A0A0C4DH41 118 aa6.55□□□□□ -1.36
GABRE-209ENST00000486255 SPTBN1Q01082 2364 aaKnown RBP6.55□□□□□ -1.36
GABRE-209ENST00000486255 ABCA1O95477 2261 aa6.55□□□□□ -1.36
GABRE-209ENST00000486255 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
GABRE-209ENST00000486255 MBD6Q96DN6 1003 aa6.55□□□□□ -1.36
GABRE-209ENST00000486255 CELA1Q9UNI1 258 aa6.55□□□□□ -1.36
GABRE-209ENST00000486255 SDK2Q58EX2 2172 aa6.55□□□□□ -1.36
GABRE-209ENST00000486255 M0R378 163 aa6.55□□□□□ -1.36
GABRE-209ENST00000486255 HEATR1Q9H583 2144 aaKnown RBP6.54□□□□□ -1.36
GABRE-209ENST00000486255 Q6ZQY7 126 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 Q6ZVQ6 151 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 ADAMTS9Q9P2N4 1935 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 GVINP1Q7Z2Y8 2422 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 IGKV2-28A0A075B6P5 120 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 IGKV2D-28P01615 120 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 POM121L12Q8N7R1 296 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 IL17DQ8TAD2 202 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 NACAE9PAV3 2078 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 A8MZ25 164 aa6.54□□□□□ -1.36
GABRE-209ENST00000486255 PI4KAP42356 2102 aa6.53□□□□□ -1.36
GABRE-209ENST00000486255 DIDO1Q9BTC0 2240 aaKnown RBP6.53□□□□□ -1.36
GABRE-209ENST00000486255 SERTAD4-AS1Q5TG53 156 aa6.53□□□□□ -1.36
GABRE-209ENST00000486255 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms