RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 BPESC1Q9GZL8 116 aa3.41□□□□□ -1.86
SMARCC1-206ENST00000485737 TMEM126AQ9H061 195 aa3.41□□□□□ -1.86
SMARCC1-206ENST00000485737 COL6A3P12111 3177 aa3.4□□□□□ -1.86
SMARCC1-206ENST00000485737 IGHV3-64A0A075B6Q5 118 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 IGLV5-39A0A0G2JS06 123 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 COX7A2LO14548 114 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 IGHV3-11P01762 117 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 TRACP01848 142 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 PF4V1P10720 104 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 TIRAPP58753 221 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 SNRPD3P62318 126 aaKnown RBP3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 CFAP161Q6P656 301 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 DAND5Q8N907 189 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 COPS9Q8WXC6 57 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC01587Q99440 93 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC00467Q9BRT7 94 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 CHCHD7Q9BUK0 85 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 BEX4Q9NWD9 120 aaPredicted RBP3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 PRRC2CQ9Y520 2896 aaKnown RBP3.4□□□□□ -1.87
SMARCC1-206ENST00000485737 MUC4Q99102 2169 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 ANKHD1Q8IWZ3 2542 aaKnown RBP3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 TRAV8-3A0A0A6YYJ7 113 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 PSMB8P28062 276 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 NBL1P41271 181 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 CXCL5P42830 114 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 KLRB1Q12918 225 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC00643Q86TS7 51 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 BBC3Q96PG8 261 aaPredicted RBP3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 SPXQ9BT56 116 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 FAM30AQ9NZY2 134 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 CFAP47Q6ZTR5 3102 aa3.39□□□□□ -1.87
SMARCC1-206ENST00000485737 LOC400499M0QZD8 3231 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 IGKV3-7A0A075B6H7 116 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 TRAV12-2A0A075B6T6 113 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 H3BUX3 64 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 PRSS2P07478 247 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 RBMY1A1P0DJD3 496 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 RBMY1CP0DJD4 496 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 EDN2P20800 178 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 UCNP55089 124 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 ZNF415Q09FC8 603 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 RBMY1FQ15415 496 aaKnown RBP3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 SPINK13Q1W4C9 94 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 MEIG1Q5JSS6 88 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 PRIMA1Q86XR5 153 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC00308Q8TCZ7 52 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 DEFB104AQ8WTQ1 72 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 CITED2Q99967 270 aaPredicted RBP3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 UBTD1Q9HAC8 227 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 TNFRSF18Q9Y5U5 241 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 ROS1P08922 2347 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 ZFHX4Q86UP3 3567 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 WDFY4Q6ZS81 3184 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 PIEZO2Q9H5I5 2752 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 BDP1A6H8Y1 2624 aa3.38□□□□□ -1.87
SMARCC1-206ENST00000485737 APC2O95996 2303 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 IGHV3OR16-10A0A075B7F0 116 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 FAM236AA0A1B0GUQ0 79 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 FAM236BA0A1B0GV22 79 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 A0A1B0GX51 115 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 RS1O15537 224 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 IGHV3-53P01767 116 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 INAFM2P0DMQ5 153 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 IGHV4-38-2P0DP08 117 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 BLCAPP62952 87 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 HERVK_113P63121 156 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 HERV-K104P63124 156 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 CIRBPQ14011 172 aaKnown RBP3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 LY6EQ16553 131 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 BRD3OSQ6XYD6 125 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 C5orf38Q86SI9 138 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 SMIM20Q8N5G0 67 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 C3orf22Q8N5N4 141 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 C10orf105Q8TEF2 133 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 SMCR5Q8TEV8 140 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 LINC00526Q96FQ7 95 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 ZNF625Q96I27 306 aaPredicted RBP3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 DUX3Q96PT4 197 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 OVOL2Q9BRP0 275 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 PIMREGQ9BSJ6 248 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 CDKN2A-AS1Q9UH64 79 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 ANKRD11Q6UB99 2663 aaPredicted RBP3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 BSNQ9UPA5 3926 aa3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 SMG1Q96Q15 3661 aaKnown RBP3.37□□□□□ -1.87
SMARCC1-206ENST00000485737 ZNF318Q5VUA4 2279 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 IGHV3OR16-12A0A075B7B8 117 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 IGHV4-61A0A0C4DH41 118 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 RBMY1BA6NDE4 496 aaKnown RBP3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 RBMY1EA6NEQ0 496 aaKnown RBP3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 SMIM1B2RUZ4 78 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 UQCRQO14949 82 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 NDUFA7O95182 113 aa3.36□□□□□ -1.87
SMARCC1-206ENST00000485737 RBMY1DP0C7P1 496 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms