RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 NMUP48645 174 aa6.96□□□□□ -1.3
UFD1-208ENST00000484101 HSD52Q0P140 79 aa6.96□□□□□ -1.3
UFD1-208ENST00000484101 STPG4Q8N801 248 aa6.96□□□□□ -1.3
UFD1-208ENST00000484101 OVOL2Q9BRP0 275 aa6.96□□□□□ -1.3
UFD1-208ENST00000484101 SPANXA1Q9NS26 97 aa6.96□□□□□ -1.3
UFD1-208ENST00000484101 MRPL16Q9NX20 251 aaKnown RBP6.96□□□□□ -1.3
UFD1-208ENST00000484101 VWFP04275 2813 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 IGHV3OR16-12A0A075B7B8 117 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 PRSS29PA6NIE9 313 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 K7EQD1 137 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 GIG44P09565 113 aaPredicted RBP6.95□□□□□ -1.3
UFD1-208ENST00000484101 RPL36AP83881 106 aaKnown RBP6.95□□□□□ -1.3
UFD1-208ENST00000484101 COTL1Q14019 142 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 BATFQ16520 125 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 CSNK1G2-AS1Q8NCQ2 148 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 OR11H2Q8NH07 326 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 KIR2DL5BQ8NHK3 375 aa6.95□□□□□ -1.3
UFD1-208ENST00000484101 RPL36ALQ969Q0 106 aaKnown RBP6.95□□□□□ -1.3
UFD1-208ENST00000484101 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 E9PLD3 99 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 RPL35AP18077 110 aaKnown RBP6.94□□□□□ -1.3
UFD1-208ENST00000484101 APOC4P55056 127 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 TAL2Q16559 108 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 C2orf91Q6ZV80 131 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 NEGR1Q7Z3B1 354 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
UFD1-208ENST00000484101 NFE4Q86UQ8 179 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 C3orf56Q8N813 242 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
UFD1-208ENST00000484101 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
UFD1-208ENST00000484101 EPPK1P58107 5090 aaKnown RBP6.94□□□□□ -1.3
UFD1-208ENST00000484101 TRBV7-3A0A075B6L6 115 aa6.93□□□□□ -1.3
UFD1-208ENST00000484101 A0A1B0GV90 55 aa6.93□□□□□ -1.3
UFD1-208ENST00000484101 A6NDN8 102 aa6.93□□□□□ -1.3
UFD1-208ENST00000484101 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
UFD1-208ENST00000484101 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
UFD1-208ENST00000484101 WFDC9Q8NEX5 89 aa6.93□□□□□ -1.3
UFD1-208ENST00000484101 ZMAT5Q9UDW3 170 aaKnown RBP6.93□□□□□ -1.3
UFD1-208ENST00000484101 IGHV3-73A0A0B4J1V6 119 aa6.92□□□□□ -1.3
UFD1-208ENST00000484101 TRBV6-4A0A1B0GX49 114 aa6.92□□□□□ -1.3
UFD1-208ENST00000484101 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
UFD1-208ENST00000484101 MPV17L2Q567V2 206 aa6.92□□□□□ -1.3
UFD1-208ENST00000484101 VCX2Q9H322 139 aa6.92□□□□□ -1.3
UFD1-208ENST00000484101 IGLV4-69A0A075B6H9 119 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 IGLV4-3A0A075B6K6 122 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 PLAC8L1A1L4L8 177 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 H7C423 109 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 P0DMU3 169 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 FAM231AP0DMU4 169 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 FAM231CP0DMU5 169 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 MRPS36P82909 103 aaKnown RBP6.91□□□□□ -1.3
UFD1-208ENST00000484101 GAGE1Q13065 139 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 Q6ZTI0 123 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 AMELXQ99217 191 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 WFDC10AQ9H1F0 79 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 GTSF1LQ9H1H1 148 aa6.91□□□□□ -1.3
UFD1-208ENST00000484101 NOP10Q9NPE3 64 aaKnown RBP6.91□□□□□ -1.3
UFD1-208ENST00000484101 MYMXA0A1B0GTQ4 84 aa6.9□□□□□ -1.3
UFD1-208ENST00000484101 PCP2Q8IVA1 136 aa6.9□□□□□ -1.3
UFD1-208ENST00000484101 LINC00612Q8N6U2 182 aa6.9□□□□□ -1.3
UFD1-208ENST00000484101 PRADC1Q9BSG0 188 aa6.9□□□□□ -1.3
UFD1-208ENST00000484101 CHCHD7Q9BUK0 85 aa6.9□□□□□ -1.3
UFD1-208ENST00000484101 CHAC1Q9BUX1 264 aa6.9□□□□□ -1.3
UFD1-208ENST00000484101 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
UFD1-208ENST00000484101 TRBV25-1A0A075B6N4 114 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 IGKV2D-26A0A0A0MRZ7 120 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 LYRM9A8MSI8 78 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 PRM2P04554 102 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 UBE2D3P61077 147 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 UBE2D2P62837 147 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 ZNF479Q96JC4 524 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 COX11Q9Y6N1 276 aa6.89□□□□□ -1.31
UFD1-208ENST00000484101 TRAV8-6A0A0B4J262 113 aa6.88□□□□□ -1.31
UFD1-208ENST00000484101 TRGV4A0A0C4DH28 118 aa6.88□□□□□ -1.31
UFD1-208ENST00000484101 TEX48A0A1B0GUV7 120 aa6.88□□□□□ -1.31
UFD1-208ENST00000484101 Q6ZSN1 163 aa6.88□□□□□ -1.31
UFD1-208ENST00000484101 ZNRF2Q8NHG8 242 aa6.88□□□□□ -1.31
UFD1-208ENST00000484101 PLEKHB2Q96CS7 222 aa6.88□□□□□ -1.31
UFD1-208ENST00000484101 CMYA5Q8N3K9 4069 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 TINCRA0A1B0GVN0 87 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 GAGE12BA1L429 117 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 GAGE7O76087 117 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 GAGE12FP0CL80 117 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 GAGE12GP0CL81 117 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 GAGE12IP0CL82 117 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 ZNF25P17030 456 aaPredicted RBP6.87□□□□□ -1.31
UFD1-208ENST00000484101 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 SLC25A29Q8N8R3 303 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 TM2D2Q9BX73 214 aa6.87□□□□□ -1.31
UFD1-208ENST00000484101 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
UFD1-208ENST00000484101 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
UFD1-208ENST00000484101 A6NJY4 79 aa6.86□□□□□ -1.31
UFD1-208ENST00000484101 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
UFD1-208ENST00000484101 H3BRM9 83 aa6.86□□□□□ -1.31
UFD1-208ENST00000484101 LEPROTO15243 131 aa6.86□□□□□ -1.31
UFD1-208ENST00000484101 MIFP14174 115 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms