RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 TRAV10A0A0B4J240 114 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 SMIM27A0A1W2PRY6 76 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 FAM223BA6NKX1 122 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 C5orf67F2Z3F1 127 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 LECT2O14960 151 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 TRGV3P03979 118 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 ARMS2P0C7Q2 107 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 CAV3P56539 151 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 ROMO1P60602 79 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 C1orf134Q5TEV5 83 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 LYPD1Q8N2G4 141 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 C4orf3Q8WVX3 66 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 UBL5Q9BZL1 73 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 C22orf24Q9Y442 160 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 FAM215AQ9Y5M1 114 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 TOP2BQ02880 1626 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 USP32Q8NFA0 1604 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 KMT2EQ8IZD2 1858 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 RGPD8O14715 1765 aaPredicted RBP1.13□□□□□ -2.23
ITGB1-213ENST00000484088 RGPD5Q99666 1765 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 MYOM1P52179 1685 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 CLTCQ00610 1675 aaKnown RBP1.13□□□□□ -2.23
ITGB1-213ENST00000484088 USP54Q70EL1 1684 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 GCC2Q8IWJ2 1684 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 TOPAZ1Q8N9V7 1692 aa1.13□□□□□ -2.23
ITGB1-213ENST00000484088 POLR1AO95602 1720 aaPredicted RBP1.12□□□□□ -2.23
ITGB1-213ENST00000484088 DOCK4Q8N1I0 1966 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 DOCK6Q96HP0 2047 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 RGPD4Q7Z3J3 1758 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 KIDINS220Q9ULH0 1771 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 TULP4Q9NRJ4 1543 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV3-64A0A075B6Q5 118 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 TRAV12-3A0A0B4J271 114 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV1-18A0A0C4DH31 117 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 TRBV10-1A0A0K0K1A3 114 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 A0A1B0GUT8 65 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 LOC101927531A0A1B0GV80 90 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 C11orf86A6NJI1 115 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 A8MWP4 228 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 HCRTO43612 131 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV1D-33P01593 117 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 IGKV1-33P01594 117 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 IGLV1-51P01701 117 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 CGB3P0DN86 165 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 CGB7P0DN87 165 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 ZNF22P17026 224 aaPredicted RBP1.12□□□□□ -2.23
ITGB1-213ENST00000484088 SPINT3P49223 89 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 FXYD6P3P58550 94 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 ERHP84090 104 aaKnown RBP1.12□□□□□ -2.23
ITGB1-213ENST00000484088 MIR22HGQ0VDD5 57 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 SFTA2Q6UW10 78 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 Q6ZQT0 140 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 Q86TA4 180 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 Q8IYB0 196 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 Q8NDZ9 215 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 MUC7Q8TAX7 377 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 CYSTM1Q9H1C7 97 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 CDC42SE2Q9NRR3 84 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 PSENENQ9NZ42 101 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 ORMDL1Q9P0S3 153 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 LENEPQ9Y5L5 61 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 U3KQK5 164 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 MYH8P13535 1937 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 ALPK3Q96L96 1907 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 ALS2Q96Q42 1657 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 KIF13AQ9H1H9 1805 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 ADGRB2O60241 1585 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 CRYBG1Q9Y4K1 1723 aa1.12□□□□□ -2.23
ITGB1-213ENST00000484088 LAMB1P07942 1786 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 MYLKQ15746 1914 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 MIA3Q5JRA6 1907 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 TICRRQ7Z2Z1 1910 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 MYO18AQ92614 2054 aaKnown RBP1.11□□□□□ -2.23
ITGB1-213ENST00000484088 KIAA1671Q9BY89 1806 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 SCN8AQ9UQD0 1980 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 JMJD7-PLA2G4BH0Y9G9 81 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 H3BQ85 93 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 HMGN4O00479 90 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 PSCAO43653 123 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV3-53P01767 116 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 IGHV3-33P01772 117 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 IGLV7-43P04211 117 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 PDE6GP18545 87 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 SPAG11BQ08648 103 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 NNATQ16517 81 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 KRTAP6-3Q3LI67 103 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 FAM27BQ5VT28 67 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 Q5VV11 94 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 C10orf113Q5VZT2 155 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 SPAG11AQ6PDA7 123 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 DMAC1Q96GE9 116 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 BPESC1Q9GZL8 116 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 TMEM167BQ9NRX6 74 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 R4GMQ9 66 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 V9GYV3 84 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 ABCC8Q09428 1581 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 ERCC6L2Q5T890 1561 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 ARHGEF28Q8N1W1 1705 aaKnown RBP1.11□□□□□ -2.23
ITGB1-213ENST00000484088 NWD2Q9ULI1 1742 aa1.11□□□□□ -2.23
ITGB1-213ENST00000484088 NLRC5Q86WI3 1866 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms