RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
SRSF6-202ENST00000483871 LINC00476Q8WZB0 136 aa9.66□□□□□ -0.86
SRSF6-202ENST00000483871 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.86
SRSF6-202ENST00000483871 C18orf32Q8TCD1 76 aa9.65□□□□□ -0.86
SRSF6-202ENST00000483871 KIR2DL4Q99706 377 aa9.65□□□□□ -0.86
SRSF6-202ENST00000483871 KMT2CQ8NEZ4 4911 aaKnown RBP9.65□□□□□ -0.86
SRSF6-202ENST00000483871 TRBV25-1A0A075B6N4 114 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 IGHV1-24A0A0C4DH33 117 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 AMTP48728 403 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 Q8N3U1 123 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 Q8N8P6 123 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 UPK3BQ9BT76 320 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 CHCHD7Q9BUK0 85 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 Q9H8V8 135 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 TRAV8-6A0A0B4J262 113 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 FCER1GP30273 86 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 TMEM97Q5BJF2 176 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 PRSS3P2Q8NHM4 247 aa9.64□□□□□ -0.87
SRSF6-202ENST00000483871 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
SRSF6-202ENST00000483871 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
SRSF6-202ENST00000483871 URB1-AS1Q96HZ7 61 aa9.63□□□□□ -0.87
SRSF6-202ENST00000483871 CHCHD5Q9BSY4 110 aa9.63□□□□□ -0.87
SRSF6-202ENST00000483871 TMEM262E9PQX1 116 aa9.62□□□□□ -0.87
SRSF6-202ENST00000483871 SIVA1O15304 175 aa9.62□□□□□ -0.87
SRSF6-202ENST00000483871 ESDP10768 282 aa9.62□□□□□ -0.87
SRSF6-202ENST00000483871 GAGE6Q13070 117 aa9.62□□□□□ -0.87
SRSF6-202ENST00000483871 TMEM243Q9BU79 118 aa9.62□□□□□ -0.87
SRSF6-202ENST00000483871 NXT2Q9NPJ8 142 aaKnown RBP9.62□□□□□ -0.87
SRSF6-202ENST00000483871 NIT1Q86X76 327 aa9.61□□□□□ -0.87
SRSF6-202ENST00000483871 IGHV3-30P01768 117 aa9.61□□□□□ -0.87
SRSF6-202ENST00000483871 IGHV3-33P01772 117 aa9.61□□□□□ -0.87
SRSF6-202ENST00000483871 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
SRSF6-202ENST00000483871 IGHV3-30-5P0DP03 117 aa9.61□□□□□ -0.87
SRSF6-202ENST00000483871 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
SRSF6-202ENST00000483871 MPV17L2Q567V2 206 aa9.6□□□□□ -0.87
SRSF6-202ENST00000483871 Q8N976 141 aa9.6□□□□□ -0.87
SRSF6-202ENST00000483871 UBE2L6O14933 153 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BKO60814 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BJP06899 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 LINC00614P0C842 121 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BOP23527 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BBP33778 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BDP58876 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BCP62807 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 LAGE3Q14657 143 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST2H2BEQ16778 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.59□□□□□ -0.87
SRSF6-202ENST00000483871 FA2HQ7L5A8 372 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BHQ93079 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BNQ99877 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 HIST1H2BMQ99879 126 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 DNAH6Q9C0G6 4158 aa9.59□□□□□ -0.87
SRSF6-202ENST00000483871 M0R2N4 97 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 C20orf203Q8NBC4 194 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 IGLV4-60A0A075B6I1 120 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 A0A087WX48 190 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 LCE6AA0A183 80 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 Q0VG73 95 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 BAGE3Q86Y29 109 aa9.58□□□□□ -0.88
SRSF6-202ENST00000483871 LINC01546A6NGU7 62 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 FGF6P10767 208 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 RBX1P62877 108 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 PMCHL1Q16048 86 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 RNASEKQ6P5S7 137 aaKnown RBP9.57□□□□□ -0.88
SRSF6-202ENST00000483871 KRTAP1-5Q9BYS1 174 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
SRSF6-202ENST00000483871 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
SRSF6-202ENST00000483871 C1orf196B1AJZ1 125 aa9.56□□□□□ -0.88
SRSF6-202ENST00000483871 K7EMI3 77 aa9.56□□□□□ -0.88
SRSF6-202ENST00000483871 NUPR1O60356 82 aa9.56□□□□□ -0.88
SRSF6-202ENST00000483871 BTF3P20290 206 aaKnown RBP9.56□□□□□ -0.88
SRSF6-202ENST00000483871 LINC00310P59036 64 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 C2orf66Q6UXQ4 117 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 NBDYA0A0U1RRE5 68 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 H7C423 109 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 SERF1AO75920 110 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 RAB5BP61020 215 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 AMMECR1LQ6DCA0 310 aa9.55□□□□□ -0.88
SRSF6-202ENST00000483871 RYR2Q92736 4967 aa9.54□□□□□ -0.88
SRSF6-202ENST00000483871 A0A096LNJ9 63 aa9.54□□□□□ -0.88
SRSF6-202ENST00000483871 A0A1B0GUV1 79 aa9.54□□□□□ -0.88
SRSF6-202ENST00000483871 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
SRSF6-202ENST00000483871 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
SRSF6-202ENST00000483871 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
SRSF6-202ENST00000483871 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
SRSF6-202ENST00000483871 MRPL52Q86TS9 123 aaKnown RBP9.53□□□□□ -0.88
SRSF6-202ENST00000483871 FAM104AQ969W3 186 aa9.53□□□□□ -0.88
SRSF6-202ENST00000483871 CYSLTR1Q9Y271 337 aa9.53□□□□□ -0.88
SRSF6-202ENST00000483871 RNASE13Q5GAN3 156 aaKnown RBP9.52□□□□□ -0.89
SRSF6-202ENST00000483871 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
SRSF6-202ENST00000483871 FAM19A2Q8N3H0 131 aa9.52□□□□□ -0.89
SRSF6-202ENST00000483871 TOMM6Q96B49 74 aa9.52□□□□□ -0.89
SRSF6-202ENST00000483871 CHCHD1Q96BP2 118 aaKnown RBP9.52□□□□□ -0.89
SRSF6-202ENST00000483871 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms