RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
CLK3-204ENST00000483723 Q8NAQ8 132 aa9.95□□□□□ -0.82
CLK3-204ENST00000483723 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
CLK3-204ENST00000483723 CHCHD7Q9BUK0 85 aa9.95□□□□□ -0.82
CLK3-204ENST00000483723 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
CLK3-204ENST00000483723 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
CLK3-204ENST00000483723 HSBP1L1C9JCN9 74 aa9.94□□□□□ -0.82
CLK3-204ENST00000483723 G3V4G9 280 aa9.94□□□□□ -0.82
CLK3-204ENST00000483723 UBE2D3P61077 147 aa9.94□□□□□ -0.82
CLK3-204ENST00000483723 UBE2D2P62837 147 aa9.94□□□□□ -0.82
CLK3-204ENST00000483723 TRRAPQ9Y4A5 3859 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
CLK3-204ENST00000483723 UQCR10Q9UDW1 63 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 PYGO1Q9Y3Y4 419 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 TRGV4A0A0C4DH28 118 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 PRSS29PA6NIE9 313 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 F8VRH5 84 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 DPM2O94777 84 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 IGKCP01834 107 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 COTL1Q14019 142 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
CLK3-204ENST00000483723 DAZ4Q86SG3 579 aaKnown RBP9.93□□□□□ -0.82
CLK3-204ENST00000483723 DAZ3Q9NR90 486 aaKnown RBP9.93□□□□□ -0.82
CLK3-204ENST00000483723 FBN3Q75N90 2809 aa9.92□□□□□ -0.82
CLK3-204ENST00000483723 NPSP0C0P6 89 aa9.92□□□□□ -0.82
CLK3-204ENST00000483723 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
CLK3-204ENST00000483723 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
CLK3-204ENST00000483723 PHLDA1Q8WV24 401 aaPredicted RBP9.92□□□□□ -0.82
CLK3-204ENST00000483723 CHTOPQ9Y3Y2 248 aaKnown RBP9.92□□□□□ -0.82
CLK3-204ENST00000483723 IGHV3-38A0A0C4DH36 116 aa9.91□□□□□ -0.82
CLK3-204ENST00000483723 PMVKQ15126 192 aa9.91□□□□□ -0.82
CLK3-204ENST00000483723 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
CLK3-204ENST00000483723 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
CLK3-204ENST00000483723 C14orf144Q96I85 54 aa9.91□□□□□ -0.82
CLK3-204ENST00000483723 GAGE12JA6NER3 117 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 CRYBA4P53673 196 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 GAGE1Q13065 139 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 GAGE4Q13068 117 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 GAGE5Q13069 117 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 GAGE13Q4V321 117 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 STPG4Q8N801 248 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 CST9LQ9H4G1 147 aa9.9□□□□□ -0.82
CLK3-204ENST00000483723 PLNP26678 52 aa9.9□□□□□ -0.83
CLK3-204ENST00000483723 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.83
CLK3-204ENST00000483723 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.83
CLK3-204ENST00000483723 GTSF1LQ9H1H1 148 aa9.9□□□□□ -0.83
CLK3-204ENST00000483723 IGLV4-3A0A075B6K6 122 aa9.89□□□□□ -0.83
CLK3-204ENST00000483723 LOC100131303A0A0U1RQF7 123 aa9.89□□□□□ -0.83
CLK3-204ENST00000483723 DEFA6Q01524 100 aa9.89□□□□□ -0.83
CLK3-204ENST00000483723 TIMM21Q9BVV7 248 aa9.89□□□□□ -0.83
CLK3-204ENST00000483723 DEFB4AO15263 64 aa9.88□□□□□ -0.83
CLK3-204ENST00000483723 COX8AP10176 69 aa9.88□□□□□ -0.83
CLK3-204ENST00000483723 AMELXQ99217 191 aa9.88□□□□□ -0.83
CLK3-204ENST00000483723 OPRPNQ99935 248 aaPredicted RBP9.88□□□□□ -0.83
CLK3-204ENST00000483723 SPANXA1Q9NS26 97 aa9.88□□□□□ -0.83
CLK3-204ENST00000483723 UBE2D4Q9Y2X8 147 aa9.88□□□□□ -0.83
CLK3-204ENST00000483723 PAPPA-AS1Q5QFB9 102 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 SBSPONQ8IVN8 264 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 IGLV4-69A0A075B6H9 119 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 SPART-AS1P0CW21 52 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 CMYA5Q8N3K9 4069 aa9.87□□□□□ -0.83
CLK3-204ENST00000483723 FGF6P10767 208 aa9.86□□□□□ -0.83
CLK3-204ENST00000483723 KPRPQ5T749 579 aaPredicted RBP9.86□□□□□ -0.83
CLK3-204ENST00000483723 SLC25A34Q6PIV7 304 aa9.86□□□□□ -0.83
CLK3-204ENST00000483723 MRPS16Q9Y3D3 137 aaKnown RBP9.86□□□□□ -0.83
CLK3-204ENST00000483723 ANK2Q01484 3957 aa9.85□□□□□ -0.83
CLK3-204ENST00000483723 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.85□□□□□ -0.83
CLK3-204ENST00000483723 IGKV2-29A2NJV5 120 aaPredicted RBP9.85□□□□□ -0.83
CLK3-204ENST00000483723 DLEU1O43261 78 aa9.85□□□□□ -0.83
CLK3-204ENST00000483723 DAD1P61803 113 aa9.85□□□□□ -0.83
CLK3-204ENST00000483723 MRPS36P82909 103 aaKnown RBP9.85□□□□□ -0.83
CLK3-204ENST00000483723 MRPL52Q86TS9 123 aaKnown RBP9.85□□□□□ -0.83
CLK3-204ENST00000483723 NFE4Q86UQ8 179 aa9.85□□□□□ -0.83
CLK3-204ENST00000483723 VCX2Q9H322 139 aa9.85□□□□□ -0.83
CLK3-204ENST00000483723 CSDC2Q9Y534 153 aaKnown RBP9.85□□□□□ -0.83
CLK3-204ENST00000483723 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
CLK3-204ENST00000483723 IGKV2D-26A0A0A0MRZ7 120 aa9.84□□□□□ -0.83
CLK3-204ENST00000483723 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
CLK3-204ENST00000483723 C11orf86A6NJI1 115 aa9.84□□□□□ -0.83
CLK3-204ENST00000483723 HNRNPA3P51991 378 aaKnown RBP9.84□□□□□ -0.83
CLK3-204ENST00000483723 TMEM97Q5BJF2 176 aa9.84□□□□□ -0.83
CLK3-204ENST00000483723 CEMP1Q6PRD7 247 aaPredicted RBP9.84□□□□□ -0.83
CLK3-204ENST00000483723 H7C423 109 aa9.83□□□□□ -0.84
CLK3-204ENST00000483723 ATP5G1P05496 136 aa9.83□□□□□ -0.84
CLK3-204ENST00000483723 CTAG1AP78358 180 aa9.83□□□□□ -0.84
CLK3-204ENST00000483723 GYPEP15421 78 aa9.82□□□□□ -0.84
CLK3-204ENST00000483723 VSIG2Q96IQ7 327 aa9.82□□□□□ -0.84
CLK3-204ENST00000483723 RETNQ9HD89 108 aa9.82□□□□□ -0.84
CLK3-204ENST00000483723 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
CLK3-204ENST00000483723 SNHG12Q9BXW3 62 aa9.82□□□□□ -0.84
CLK3-204ENST00000483723 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
CLK3-204ENST00000483723 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
CLK3-204ENST00000483723 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
CLK3-204ENST00000483723 PAX4O43316 350 aa9.81□□□□□ -0.84
CLK3-204ENST00000483723 SMAGPQ0VAQ4 97 aa9.81□□□□□ -0.84
CLK3-204ENST00000483723 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms